Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1508 ATGCTCTGTGCAAGTATCTGCCACACAGACTTCTTAAGAGCTCGAGGTTATGCTAATCCCTCTTTTCCTCTAGCACTTGGGCATGAAGGAGTAGGTGTTGTGGAGAGTGTAGGAGAGAGAGTGACAGATCTAAAAGTAGGAGATGTAGTGATTCCAGTATACATTGGAGAGTGTGGAGAATGTGAGAATTGTGCTTCAGGGGAATCAAACATGTGCATGAGATATCCTCTGAGGGTGAGTGGATTAATGCCTGATGACACATCAAGGATTTCAATTAGAGGCCAAAAGGCATACCATTTGTTTACCTGCTCAACATGGTGTGAGTACATGGTTAGTGATGCAAACTACCTGATCAAAGTCGATCCAAGTATTGATTTGGCTCATGCTAGCTTCATCTCTTGTGGATTTTCTACTGGTTTTGGCGCTTCTTGGAAGACAGCCCAAGTTCGAAGCGGATCGACTGTGGCTGTTTTTGGCCTCGGAGCTGTTGGATTAGGGGCTATAAGTGGTGCCAAGATGATGGGAGCAACTAAGATAATTGGGATTGACATAAATGAGAAGAAGAAAGAAAGAGGAGAAGCTTTTGGGATGACGGACTTCATAAATCCTAATGAACATTCCAATAGGCCTTCTTCTCAATTGGTGAAGGACCTCACAAGTGGACTTGGTGTGGATTATGCCATTGAGTGCACTGGTTTTGCCCCCTTGGTCACTCAGGCCCTGGAATCCACCAAAGTGGGGAGAGGAAAGGCAGTAGCAATCGGTGCAGGAATAGAAGAATGTGTGCAAGTCAACTGGTTGGGTCTTCTTCTTGGAAGAACTTTGAAGGGTTCAGTTTTTGGAGGCTTGAAACCCAAATCTGACCTTTCTATTGTGGCTGCCAAATGCCAAAACAAGGATTTCCCTCTCGATGAGCTTTTAACTTATGAAGTCCCGTTGACAGAGATAAATAAAGCTTTTGATCTCTTTAAACAGCCAGATTGTGTCAAAGTTATTATCAAGATGTGA 1008 0.4385 MLCASICHTDFLRARGYANPSFPLALGHEGVGVVESVGERVTDLKVGDVVIPVYIGECGECENCASGESNMCMRYPLRVSGLMPDDTSRISIRGQKAYHLFTCSTWCEYMVSDANYLIKVDPSIDLAHASFISCGFSTGFGASWKTAQVRSGSTVAVFGLGAVGLGAISGAKMMGATKIIGIDINEKKKERGEAFGMTDFINPNEHSNRPSSQLVKDLTSGLGVDYAIECTGFAPLVTQALESTKVGRGKAVAIGAGIEECVQVNWLGLLLGRTLKGSVFGGLKPKSDLSIVAAKCQNKDFPLDELLTYEVPLTEINKAFDLFKQPDCVKVIIKM 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1508 335 SUPERFAMILY GroES-like 288 333 IPR011032 -
Prci6g1508 335 Gene3D - 139 278 - -
Prci6g1508 335 Pfam Alcohol dehydrogenase GroES-like domain 3 120 IPR013154 -
Prci6g1508 335 Gene3D - 1 330 - -
Prci6g1508 335 FunFam alcohol dehydrogenase 1-like isoform X1 1 138 - -
Prci6g1508 335 Pfam Zinc-binding dehydrogenase 162 282 IPR013149 -
Prci6g1508 335 SUPERFAMILY GroES-like 2 148 IPR011032 -
Prci6g1508 335 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 124 296 IPR036291 -
Prci6g1508 335 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 27 41 IPR002328 GO:0008270|GO:0016491
Prci6g1508 335 PANTHER ALCOHOL DEHYDROGENASE 1 327 - -
Prci6g1508 335 FunFam S-(hydroxymethyl)glutathione dehydrogenase 139 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1508 Prci-Chr6 11859964 11862754 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1508 1 295 Monolignol Biosynthesis Gene Families AT4G37990 26.333 1.46e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1508 K00121 - gmx:100798341 461.455