Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1480 ATGCACTTCCCTTTGTGTGTGTGTTTTTGGTCAGATCATGCAGTTGCTGGAACAGAGTCACAACTTCGAATTCAAAGTCTTGGCAACTTAGACCAAACAAAGGAGAGCAAAGCCGATGACGGTAAAGCCGTATCCAGCGTCCACCACAGGCACTATCCTTCGCCGCCGCCATCGTCGCCGCCGCCGCCACAGTACCCGCCACTTCAGTGCGGAGCCTTCCAAGGCATCTCCAACAACCATCCGGCTCCTCAACCGCCAATCAGCTACCATCAGGCGGTGCCATCTCCAGGCGCCGTCAACACATCTCATCCTCATGGTTATGCAGTCACTGGAGGAATGCCTGTGACAGAGAGTCAGCTTCCTTGTTGTGGTATTGGCTTCGGTTGGTTCATGTTTATAATAGGTTTCGTCCTTAGTCCAATCCCTTGGTACGTTGGAGCATTTCTACTTTTTTGCAAAATGGACCCCAGAGAGAGATCTGGACATATTGCTTGTGCAGTTGCGGCTGTTCTTTTTACGATTGCCATTATTGCCATTATTATTATGGTGAAAAACACAGGAAGTGGTGGCTCTCGTTAA 579 0.4974 MHFPLCVCFWSDHAVAGTESQLRIQSLGNLDQTKESKADDGKAVSSVHHRHYPSPPPSSPPPPQYPPLQCGAFQGISNNHPAPQPPISYHQAVPSPGAVNTSHPHGYAVTGGMPVTESQLPCCGIGFGWFMFIIGFVLSPIPWYVGAFLLFCKMDPRERSGHIACAVAAVLFTIAIIAIIIMVKNTGSGGSR 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1480 192 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 41 180 IPR044804 -
Prci6g1480 192 MobiDBLite consensus disorder prediction 30 64 - -
Prci6g1480 192 MobiDBLite consensus disorder prediction 33 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1480 Prci-Chr6 11524993 11531399 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1480 53 177 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 26.738 3.41e-16 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1480 - - pcin:129313879 352.829