Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1456 ATGCAGCAATATCAGCTCAAGAAGGATATTAAAGAATTGGGTTTCTTCACCGAGTATGGGGATGCCAATAGATACAAGCTTCTTGAAATGATAGGGAAGGGTAGCTATGGAGTTGTTTGTGCGGCAATTGACACACACACTGGGGAAAAAGTAGCAATAAAGAAGATCCATGATGTTTTTGACCATGCATCTGATGCCATTAGAATTCTTCGTGAAGTCAAATTACTCAGGCTTTTAAGGCACCCTGATATAGTAGAAATTAAGCGGATAATGTTGCCACCTTCAAAGAGAGATTTTAAAGATATTTATGTAGTCTTTGAACTCATGGAATCTGATCTCCATCAAGTCATTAAAGCTAATGATGATTTGACCCGTGAACACCATCAGTTTTTTCTTTATCAGCTCCTACGTGCATTGAAATATATGCATACAGCAAATGTGTATCACAGAGACCTCAAACCCAAGAACATATTGGCAAATGCAAATTGCAAGCTCAAAATATGTGATTTTGGACTCGCAAGAGTTGCATTCAATGATGCTCCAACTACAATATTTTGGACAGATTATGTTGCTACTAGATGGTACCGAGCCCCGGAACTGTGTGGAGCATTCTCTTCTAAGTATACACCAGCTATTGATGTATGGAGCATTGGTTGCATCTTTGCTGAGGTCCTAACTGGAAAACCGTTGTTTCCTGGTAAAAGTGTTGTACATCAGTTAGATTTGATTACTGATCTTCTTGGAACCCCATCTTCAGAAACTATTTCAGGAGTTCGAAATGAGAAGGCAAGAAAGTACTTGATGGAAATGCGAAAAAAACGGCCTGTGCCTTTTGAGCAGAAATTTCCAAATGCAGATCCATTGGCACTGCGCCTTTTGCAAAGGCTTCTAGCATTTGATCCCAAACATCGGCCAACTGCTGAAGAGGCACTGGCTGATCCTTATTTCAAGGGCTTGGCCAGAGTTGAGAGAGAACCTTCTTGTCAGTCAATTTCAAAGTTGGAATTTGAGTTTGAGAGGCGAAGGTTGACAAAGGCCGATATTAGAGAACTAATATATCGTGAAATACTGGAATATCATCCTCAAATGCTTAAAGATTACATGAATGGAACTGGAGGAAACTTCCTCTATCCTAGTGCAATAGGCCAATTCAGAAATCAATTTACTTATCTTGAGGAAAATGGTGGCTCTGTCACTCCGCCTGAAAGGAAGCATGTCTCCCTTCCAAGGCCTGCTATTCACTCAAGTACAATCCCTCATAATACAAAATCAAATTTCAATTTGTATGAGAACAAGCAAAATGCAGAAGAGGCATCTAAGAGTATGAGAGCAGCAGAATCAAATTCTGGAAGTCTATTGAGGGGTTCTTTGCCTCCACCAAGGGCGCCAACAGCTAAGCCAGGGAGAGTGGTAGGTCCGGTTGTACCATATGAAAATGGGGGAAGCACAAATACTTATTATGACCCAAGGATCTTTTATCAAAACTCTCTTCCCCAGGCTGCGGGTTCTCCTCACTGCTATTTTAGACCTCAACCCACAAACTCACAGAAGACTGTGTCAGAGATACACCAGGTTTTCTCACAGTGCAAGCATCAAATCCCATTCCCGCAGTGTTACCACCTAACTAGACCTGCAATTGACCTCAACACCAACCCATATCACCAAGAAGCCAAGATTGATCGGTTTGATAATCCCATGATTACAATCGACGTGAAGCTGCTACAGGCACAATCTCACTTCGGTGCAGTTGGTGCCACAGCAGTAGCTGTTGCAGCTCACAGACATTCTAGTGCTGTTCAGTATGGATTGTCATAG 1815 0.4182 MQQYQLKKDIKELGFFTEYGDANRYKLLEMIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFDHASDAIRILREVKLLRLLRHPDIVEIKRIMLPPSKRDFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQLLRALKYMHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDAPTTIFWTDYVATRWYRAPELCGAFSSKYTPAIDVWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSSETISGVRNEKARKYLMEMRKKRPVPFEQKFPNADPLALRLLQRLLAFDPKHRPTAEEALADPYFKGLARVEREPSCQSISKLEFEFERRRLTKADIRELIYREILEYHPQMLKDYMNGTGGNFLYPSAIGQFRNQFTYLEENGGSVTPPERKHVSLPRPAIHSSTIPHNTKSNFNLYENKQNAEEASKSMRAAESNSGSLLRGSLPPPRAPTAKPGRVVGPVVPYENGGSTNTYYDPRIFYQNSLPQAAGSPHCYFRPQPTNSQKTVSEIHQVFSQCKHQIPFPQCYHLTRPAIDLNTNPYHQEAKIDRFDNPMITIDVKLLQAQSHFGAVGATAVAVAAHRHSSAVQYGLS 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1456 604 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Prci6g1456 604 FunFam Mitogen-activated protein kinase 111 339 - -
Prci6g1456 604 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Prci6g1456 604 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Prci6g1456 604 MobiDBLite consensus disorder prediction 434 475 - -
Prci6g1456 604 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1456 604 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1456 604 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Prci6g1456 604 MobiDBLite consensus disorder prediction 434 454 - -
Prci6g1456 604 CDD STKc_TDY_MAPK 24 361 - -
Prci6g1456 604 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Prci6g1456 604 FunFam Mitogen-activated protein kinase 15 119 - -
Prci6g1456 604 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1456 604 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1456 Prci-Chr6 11161155 11167679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1456 1 602 MAP Kinase Gene Family AT1G53510 68.599 0.0 792
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Prci6g1456 Pkinase 5.8e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1456 - - gmx:100800878 949.888