Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1442 ATGTTTTGCTTTCTCAGAAAACTCATTCCTTCTAGGAGGCATTTCATCAACACAGCTTCTCCTTCAACATTTCAACAATTGCTTTGCGTTGAAAATCCATCGCTACCTGCCACTGCCAGGTACTGTAATTCAATTACATTCAATGCGCATTCTTTCACTGTCTCATATCTCATTGATACATGTGGCTTCTCACCCGATCAAGCCGTTTCCGCTTCCAAGTATGTCAACTTCCAAACACGAGAAAAACCAGATTTGGTTATCAATTTCCAGAAGAATCTCGGATTCACAAAATCCCAGATTCTTCGTTTCACGAGTGAAGTCCCTCAGCTTCTTCGATCTGACCCTGAGAAAACTTTACTTCCCAAGATTGAGTTTTTCATATCCAGAGGCGTTTCGAGCTCAGACATCCCTAGGCTCTTGTGTAGTTGTCCCAACGTCATGAGAAGAAGCTTGGATCAGCAGCTCATTCCTTCCTTTGATTTCCTTGGAGATTTGTTTCAATCTGATGACAAGCTCATTAAAGCTCTTACGTGTTTCTCGGGCATTCTTCTTGATGTTAACGCCCGTGCCGTGCCCAATATGAAGCTATTAAGAGAAGTCGGAGTTCCTGAGTCAAATGTCAGAAAATTGTTGGAATGGTATCCTAGGACATTAACTAAAAACACTGGCAAATTCAAGATGATAGTGGAGGAACTTAAGGAAATGGGTTTTGATCCTTTAAAATTTCAATTTATTATGGCCATCTATGCGCTGTCATCACTAAGCAAATCTACATGGTCAAAAAAGGCTGATGTGTATAAGAAGTGGGGCTGGTCTGGCGATGACATAATTGCTGCTTTTAGAAGGTGTCCATCTTGTATGAAGGCATCTGAGGATAAAATTGACGCAATTATGGGGTTTCTTGTCTACCAATTGGGCTGTCCACCTTCCATTATTACCAAACATGCAGTGGTTTTGTCACTTAGTTTGAATAAGCGAATTGTTCCACGCGGTTCCGTCTTTCAAGTTTTGTTGTCAAAGGGTCTGGTGAAAAAGGAAAGATGGATCAAATTATTTATCTACACTGAAAGGGAATTTCTTGATAGATTTATACTGTGTCATGAGGAGGAAGCTAGTGAACTACTGAAACTATATCAGTCTAAACTTGGTCTTGCATAG 1158 0.405 MFCFLRKLIPSRRHFINTASPSTFQQLLCVENPSLPATARYCNSITFNAHSFTVSYLIDTCGFSPDQAVSASKYVNFQTREKPDLVINFQKNLGFTKSQILRFTSEVPQLLRSDPEKTLLPKIEFFISRGVSSSDIPRLLCSCPNVMRRSLDQQLIPSFDFLGDLFQSDDKLIKALTCFSGILLDVNARAVPNMKLLREVGVPESNVRKLLEWYPRTLTKNTGKFKMIVEELKEMGFDPLKFQFIMAIYALSSLSKSTWSKKADVYKKWGWSGDDIIAAFRRCPSCMKASEDKIDAIMGFLVYQLGCPPSIITKHAVVLSLSLNKRIVPRGSVFQVLLSKGLVKKERWIKLFIYTEREFLDRFILCHEEEASELLKLYQSKLGLA 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1442 385 SMART mt_12 137 168 IPR003690 GO:0003690|GO:0006355
Prci6g1442 385 SMART mt_12 208 238 IPR003690 GO:0003690|GO:0006355
Prci6g1442 385 SMART mt_12 309 343 IPR003690 GO:0003690|GO:0006355
Prci6g1442 385 SMART mt_12 101 132 IPR003690 GO:0003690|GO:0006355
Prci6g1442 385 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Prci6g1442 385 PANTHER CGI-12 PROTEIN-RELATED 49 370 IPR003690 GO:0003690|GO:0006355
Prci6g1442 385 Pfam mTERF 184 359 IPR003690 GO:0003690|GO:0006355
Prci6g1442 385 Pfam mTERF 88 238 IPR003690 GO:0003690|GO:0006355
Prci6g1442 385 FunFam Mitochondrial transcription termination factor-like 151 371 - -
Prci6g1442 385 Gene3D Transcription termination factor 3, mitochondrial 168 377 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1442 Prci-Chr6 11086064 11088886 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci6g1442 mTERF 2.3e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1442 K15031 - qsa:O6P43_003531 379.407