Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1440 ATGCCCCAACCCCAACTCCAAGTCGAAAATAAAAAAGAAAAAAGAAAAAACCCACTTTTGTTAACGTTTACGACTGACCTGTCATTCTCCTATTTTCTTTTGAATTTTCTTTTGGAAGGACTTTTATTTTCAGGCCTAGAAGCTGTCTTCGTGTTATACTGGTACTACTGCCACGACTCCGAGCGAGGGTTTTTCCTTCCTCCCAAGTTTCTTGAATCCATGTTTTCCATTCTCGGGAAATCATCCCTTCTCGGAGGCATATCGTCAACGCAATCTCTCCTTCAGCATCTCAACAATTGCATCGTGTTCGAAACGAATGGCTACTTGCCACTGCCAGCCAGGTACTGTAATTCAACTACATTAAATGGGCATTCTTTCACTTTCTCATATCTCATTGATACATGTGGCTTCTCACCAGATCAAGCTGTTTCAGCTTCCAAGTATGTCAGCTTCCAAACACGAGAAAAACCAGATTTGGTTATCAATTTCCTGAAGAATCTCGGATTCACAAAATCCCAGATTCTTCGTTTCACGAGTGAAGTCCCACAGTGTCTTCGATCTGTCCCTGAGAAAACCTTACTGCCGAAGATTGAGTTTTTCATATCCAGAGGCGTTTCCCGCTCAGACATCCCTAGGCTCTTCTCATTCCCTTCCTTTGATTTCTTCCGAGATTTGTTTCAATCTGATGACACGCTCGTTAAAGCTCTTACGCATTGCTCTGGCATTCTTCTTGATATTAAAACCCATGCCGTGCCCAATATGAAGCTATTAAGGCAAGTCGGAGTTCCTGAAGCAAATGTCGGCAAATTGTTGCAATGGTATCCTAGGACAATTACTAAAAGTGCTGGAAAATTCAAGGTGATAGTGGAGGAACTTCAGGAAATGAAGTTTGATCCTTTCAAAGTTCAATTTATTATGGCTGTCTTTGCTTTGTCGTCACTAAGCAAATCTACATGGTCAAAAAAGGTTGATGTGTATAAGAAGTGGGGCTGGTCTGACAATGACATTATTGCTGCTTTTAGAAAGTCTCCATTTTGTATGAAGTCATCTGAAGATAAAATTGATGCTATATTGGAGATTCTTGTTGATAAATTGGACTGTTCGCCTTCCACTATTTCCAATTATGCTGTAATTCTGACATCGAATTTGAATAAGCGAGTTGTTCCTCGGGCTTCTGTCATTCAAATGTTGTTGTCAAAGGGTCTGATGAAAAAGAAGAGCATGCTCTCAATGTTTGTCTGCACTGAAAGGGATTTTTTGAATAAATTTATCCTGTGTCATAAGGAGGAAGCTAGTGAACTCCTGAAGCTGTATGAGTCTAAACTAAACTGA 1332 0.4032 MPQPQLQVENKKEKRKNPLLLTFTTDLSFSYFLLNFLLEGLLFSGLEAVFVLYWYYCHDSERGFFLPPKFLESMFSILGKSSLLGGISSTQSLLQHLNNCIVFETNGYLPLPARYCNSTTLNGHSFTFSYLIDTCGFSPDQAVSASKYVSFQTREKPDLVINFLKNLGFTKSQILRFTSEVPQCLRSVPEKTLLPKIEFFISRGVSRSDIPRLFSFPSFDFFRDLFQSDDTLVKALTHCSGILLDIKTHAVPNMKLLRQVGVPEANVGKLLQWYPRTITKSAGKFKVIVEELQEMKFDPFKVQFIMAVFALSSLSKSTWSKKVDVYKKWGWSDNDIIAAFRKSPFCMKSSEDKIDAILEILVDKLDCSPSTISNYAVILTSNLNKRVVPRASVIQMLLSKGLMKKKSMLSMFVCTERDFLNKFILCHKEEASELLKLYESKLN 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1440 443 SMART mt_12 337 368 IPR003690 GO:0003690|GO:0006355
Prci6g1440 443 SMART mt_12 302 332 IPR003690 GO:0003690|GO:0006355
Prci6g1440 443 SMART mt_12 175 206 IPR003690 GO:0003690|GO:0006355
Prci6g1440 443 SMART mt_12 369 403 IPR003690 GO:0003690|GO:0006355
Prci6g1440 443 SMART mt_12 268 298 IPR003690 GO:0003690|GO:0006355
Prci6g1440 443 Gene3D Transcription termination factor 3, mitochondrial 138 215 IPR038538 -
Prci6g1440 443 Gene3D Transcription termination factor 3, mitochondrial 216 437 IPR038538 -
Prci6g1440 443 FunFam Mitochondrial transcription termination factor-like 214 431 - -
Prci6g1440 443 PANTHER CGI-12 PROTEIN-RELATED 122 430 IPR003690 GO:0003690|GO:0006355
Prci6g1440 443 Coils Coil 428 443 - -
Prci6g1440 443 Pfam mTERF 220 420 IPR003690 GO:0003690|GO:0006355
Prci6g1440 443 Pfam mTERF 161 214 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1440 Prci-Chr6 11074408 11075931 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci6g1440 mTERF 9.3e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1440 K15031 - qsa:O6P43_003531 309.686