Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1436 ATGTCTCGTTTTCTCCGCAGAGCCATTCCTTTTCGGCGGCATATTATCAAAGCGATTTCTCCTTCAAAATTTCAACCTCAGCTTTGTCTTCAAAGCCAGTGGTTTCCTGTTAGGTACGCTAACTCAAACGCCTCGAATGAGAGCTCTTTCATGGTCTCATATCTCATTGACACGTGTGGCTTCTCGCCCAAAGAAGCTGAAGCAGCTTCTAAGCGTCTCAGCTTCGAGACGAGAGAGAAGCCAGATTTGGTTATCAAGTTCCTGAAAAGTCAAGGATTCTCACAGCCCCTCATTCTTGGTCTCATTAGAAAGGCCCCATGGTTTCTTCGGTCTGATCCTGAAAAAACCTTTCTGCCCAGGATTGAATTTTTCAAATCCAGAGCTCTTGAACATTCCTCGGGCATTCTTCTTCGTTCTAGAACCTCTACCGCGCCTAAAATAGAGATATTTCGAGAAGCAGGAGTTCCTGAATCAAATATCATCAAATATTTGCAATTTTACTCTAGATCATTTACTTTTTCTTCTCCTGCTCGAATTAAGAAGATTGTGGAGGAAGTGAAAGAACTTGGTTTTGATCCTTTGAAGCTTCAATTCCTTATGGCTGTTCATGTATGCTTATCCTTAAAAAAATCCACACTGGCTAAAAAGGCAAATGCTTTGAAGAAGTGGGGTTTCTCTGACCATGACATTCTTGCAGCATTTAGAAAGTTCCCCTGCTGTCTGACGCTGTCAGAAGATAAGATTGATGCAACATTAGAGTTTCTTATCCATAAATTGGGCTGTGATCCTTCCGTTATCAGTAGCACATATCCTTTTGTTTTGGGATATAGTTTGAAAAAGCGACTTGTTCCCAGAGGTGCTGTCCTTCAAGTTCTGTTGTCAAAGGGTCTGGTGAAAAGAAAAACTTTGCTTTCAACAATGTTGTATACGGAAAATGACTTTTTAAGGAGGCTTGTCCTTTGTCATGGGCAAGAAGCTAATGCGTTATTGGAGTTGTATCGTGCAAAACTGGATCAAGCAAAGTGA 1026 0.4133 MSRFLRRAIPFRRHIIKAISPSKFQPQLCLQSQWFPVRYANSNASNESSFMVSYLIDTCGFSPKEAEAASKRLSFETREKPDLVIKFLKSQGFSQPLILGLIRKAPWFLRSDPEKTFLPRIEFFKSRALEHSSGILLRSRTSTAPKIEIFREAGVPESNIIKYLQFYSRSFTFSSPARIKKIVEEVKELGFDPLKLQFLMAVHVCLSLKKSTLAKKANALKKWGFSDHDILAAFRKFPCCLTLSEDKIDATLEFLIHKLGCDPSVISSTYPFVLGYSLKKRLVPRGAVLQVLLSKGLVKRKTLLSTMLYTENDFLRRLVLCHGQEANALLELYRAKLDQAK 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1436 341 Coils Coil 323 341 - -
Prci6g1436 341 Pfam mTERF 144 312 IPR003690 GO:0003690|GO:0006355
Prci6g1436 341 Pfam mTERF 80 193 IPR003690 GO:0003690|GO:0006355
Prci6g1436 341 Gene3D Transcription termination factor 3, mitochondrial 130 331 IPR038538 -
Prci6g1436 341 Gene3D Transcription termination factor 3, mitochondrial 49 129 IPR038538 -
Prci6g1436 341 FunFam Mitochondrial transcription termination factor-like 113 326 - -
Prci6g1436 341 SMART mt_12 264 298 IPR003690 GO:0003690|GO:0006355
Prci6g1436 341 SMART mt_12 231 262 IPR003690 GO:0003690|GO:0006355
Prci6g1436 341 SMART mt_12 161 192 IPR003690 GO:0003690|GO:0006355
Prci6g1436 341 SMART mt_12 99 130 IPR003690 GO:0003690|GO:0006355
Prci6g1436 341 SMART mt_12 196 226 IPR003690 GO:0003690|GO:0006355
Prci6g1436 341 PANTHER CGI-12 PROTEIN-RELATED 48 132 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1436 Prci-Chr6 11054291 11055452 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci6g1436 mTERF 1.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1436 K15031 - qsa:O6P43_003531 246.514