Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1434 ATGCAAGACAGTAGATTCAGGTACGCTTCTTCAACCTCGTCGAATGGGCATTCTTTCACCGTCTCTTATCTCATTCACGCCTGTGGCTTGTCACCCAAACAAGCTGTTTCAGCTTCCAAGCGTGTCAGCTTCGATACGCGAGATAAGCCAGATTTGGTTATCAATTTCCTGAAAAGTCATGGATTCTCACGGCCCCAGATTATTGGTTTCATTAAACAGGTCCCAGAGTTTCTTCGATCTGATCCTGAGAAAACCTTTCTGCCCAAGATTGAATTTTTCAAATCAAGGGGCGTTCCGACCTCACACATCCCTAGGCTCGTATGTAGTTATCCTCAGATCATGTCAAGAAGCTTAACGAAGCAGCTCATTCCTTCCTTTGACTTCTTTCGAGATGTGTTTCAATCTGATGAGAATCTCGTTAAAACTCTTCGATATTGCTCGGGCATTCTTCTTGATATCAACACACGTGCCGTGCCTAATATGCAGCTATTGCGAGGAGCAGGAGTTCCTGAATCAAATGTCATCAAGTTGTTGCAGTATTTTCCTAGGGCATTAACTTACAGTCCTAATCAATTTAAGAGCATCGTGGAAAGAGTGAAGGAAATCGGGATTAATCCTTTGAAGTTTCAATTTCTTATGGCTGTTCATGTATACTCATCCTTCAGCAAATCCACATTGGCGAAAAAGGCTGATACTTATAAGAAGTGGGGTTGGTCTGACAATGATATTCTCGCAGCATTTAGAAGGTACCCCTTCTGCATGACTGTGTCAGAGGATAAGCTTGATGCAGCATTGGAATTTCTTGTCCATAATTTAGGCTGTGATTCTTCCGTTATTAGTACATATCCTATTGTTTTGGCGTACAGTTTGAGAAAACGAATTGTTCCAAGAGGTGCTGTTCTTCAAGTTCTCTTGTCAAAGGGTCTGGTGAAAAGCAAAACTTTGCTTGCAACATTTGCATATACGGAAAAGGTCTTTTTAAGGAGGCTTGTCCTTTGTCATGGGCAAGAAGCTAATGAGTTATTGGAGTTGTATCGTACAAAACTGGATCAAGCAAAGTGA 1062 0.4171 MQDSRFRYASSTSSNGHSFTVSYLIHACGLSPKQAVSASKRVSFDTRDKPDLVINFLKSHGFSRPQIIGFIKQVPEFLRSDPEKTFLPKIEFFKSRGVPTSHIPRLVCSYPQIMSRSLTKQLIPSFDFFRDVFQSDENLVKTLRYCSGILLDINTRAVPNMQLLRGAGVPESNVIKLLQYFPRALTYSPNQFKSIVERVKEIGINPLKFQFLMAVHVYSSFSKSTLAKKADTYKKWGWSDNDILAAFRRYPFCMTVSEDKLDAALEFLVHNLGCDSSVISTYPIVLAYSLRKRIVPRGAVLQVLLSKGLVKSKTLLATFAYTEKVFLRRLVLCHGQEANELLELYRTKLDQAK 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1434 353 SMART mt_12 209 239 IPR003690 GO:0003690|GO:0006355
Prci6g1434 353 SMART mt_12 244 275 IPR003690 GO:0003690|GO:0006355
Prci6g1434 353 SMART mt_12 276 310 IPR003690 GO:0003690|GO:0006355
Prci6g1434 353 SMART mt_12 104 136 IPR003690 GO:0003690|GO:0006355
Prci6g1434 353 SMART mt_12 175 205 IPR003690 GO:0003690|GO:0006355
Prci6g1434 353 SMART mt_12 68 99 IPR003690 GO:0003690|GO:0006355
Prci6g1434 353 Pfam mTERF 151 326 IPR003690 GO:0003690|GO:0006355
Prci6g1434 353 Pfam mTERF 54 205 IPR003690 GO:0003690|GO:0006355
Prci6g1434 353 FunFam Mitochondrial transcription termination factor-like 118 338 - -
Prci6g1434 353 Gene3D Transcription termination factor 3, mitochondrial 135 343 IPR038538 -
Prci6g1434 353 PANTHER CGI-12 PROTEIN-RELATED 15 334 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1434 Prci-Chr6 11054043 11060663 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci6g1434 mTERF 6.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1434 K15031 - qsa:O6P43_003532 364.385