Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1420 ATGGTTCGCTTTCGGATTGATCATAGTGCTGGAAATAAGTATAATGGTTGCGATAATTCTCATTATTTTCCCAGTCGCGCTGAAGGGGTATTAAGAGAAAGTGAGCTAAGTAGCAAGGTCTCTCATTTGAACAAATCAAATGGTTATAATCATGGGGGGCCTTTTAGACAACGACTTTTGGTGGTGGCCAACAGGCTGCCAGTCTCCGCAGTTAGGACAAGTGAAGGCTCGTGGTCCATGGAGATGAGTGCTGGTGGTCTTGTGACTGCTCTTCTAGGTCTCAAGGAGTTTGAGGCAATTTGGATAGGTTGGGCTGGTGTCAATGTGTCGGATGAGATTGGACAGAAGACGCTTGCTAAAGCTTTGGCTGAAAAGAGGTGCATTCCGGTATTTCTTGATGAAGAGATTGTTCATCAATATTATAATGGTTACTGCAACAACATCTTGTGGCCCCTTCTACATTACCTTGGACTTCCACAAGAAGATCGCCTTGCCACCACAAAGAATTTCCAATCTCAGTTTGAAGCGTATAAGAAAGCAAATCAAATGTTTGCTGATGTTGTGAAAAAGCATTATCAGGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTCATGTTTCTTCCAAAATTCCTAAAGGATTATGACAGAAACATGAAAGTTGGCTGGTTTCTCCATACACCATTTCCATCTTCGGAAATTCATAGGATGCTGCCATCTAGATCAGAGCTCCTGCATTCTGTTATTGCAGCTGATTTAGTTGCTTTTCACACCTATGATTATGCACGGCACTTTGTTAGCGCTTGTACTCGCATCCTTGGGCTTGAGGGTACACCTAAAGGGGTTGAGGATCAAGGGAGGTTGACTCGAGTTACTGCATTTCCAATTGGGATAGACTCAGATCGATTCGTACGTGCACTTGAGCTTCCTCAAGTTAAGGATAGCATCAAAGAATTCGAAGAAAGATTTAGAGGCAGAAAGGTAATGTTAGGCGTTGATCGCCTTGATATGATTAAGGGAATTCCTCAGAAAATTCTAGCATTTGAAAAATTTCTGGAAGAGAATGCCTATTGGCGTGATAAAGTAGTTTTGGTTCAAATTGCTGTGCCAACAAGAACAGATGTTCTTGAATATCAAAAGCTTACAAGCCAGGTTCATGAAATTGTTGGTCGCATTAATGGAAGATTTGGAACACTGACTGCTGTTCCTGTACTTCACCTGGATCGCTCTCTTGAGTTTCATAAACTATGTGCTTTGTATGCTGTAACTGATGTAGCCCTTGTCACGTCTTTGAGGGATGGGATGAATCTTGTCAGTTATGAATATGTGGCCTGCCAGGAGAGGAAGAAGGGGGTACTCATTCTTAGCGAATTTGCTGGGGCTGCTCAGTCTCTAGGTGCTGGTGCAATTCTGGTTAACCCTTGGAACATCACAGAAGTTGCTGCTGCAATTGACCAGGCTCTGAATATGCCATCTGAGGAAAGAGAGAAGCGGCATGCACACAACTTCTCACATGTAAAAACCCACACTGCTCAGGAATGGGCAGGAACTCTTGTAAGTGAACTAAATGAAACTGTTGCTGAGCAACAACGAAGGACAAGACAAGCTCCAGCCCCACTTCCAACCAAGGATGCAGTGGAACATTATCTGCAGTCAACTAATCGATTGATCATTTTGGGATTCAATGGATGTTTAACTGAACCAGTCGGGAAAAAAGGTGGTCAGATTAAAGAAATGGAACTTAATGTGCATCCAGAATTAAAACAGCCATTGACAGAACTATGCAGTGACCCAAATACCACTATTATTGTTCTTAGTGGAAGTGATAGAATAGTCTTAGAGGAGAATTTTAGGGAGTATGACCTGTGGTTGGCCGCCGAGAATGGGATGTTTATACACCATGCAAAAGGAAAATGGATGTCAACAATGCCAGAGCTTCTGAATATGGAATGGGTTGATAGTGTGAAGCATGTTATTGAGTACTTCACCGAAAGAACACCCCGGTCACATTTTGAAGAACGGGCAACATCAATCGTGTGGAATTACAAATATGCAGATGTTGAATTTGGAAGACTTCAAGCAAGGGACATGCTGCAGCATCTCTGGACAGGTCCAATCTCTAATGCACCAGTTGATGTCATTCATGGTAGCCGATCTGTTGAAATTCGTGCCGTTGGTGTAACAAAGGGAGCAGCTATGGACCGCATCCTAGGTCACATAGTACACTGTAAATCCATGACATCACCGTTTGATTATGTCCTGTGTATAGGACATTTTCTGGCAAAGGATGAAGATGTTTTTACCTTCTTCGAGCCGAGCTCTCCTTCTACTGATTCGGATCTTCCACGAGCAAAGGAGACTGACAGAGTTGAGTTTTGTGCTGAGAAGAGATTGCCATCGAAGACTCCAGCCAGTAAAAGTGGACCAAAGGCATCCCAAAGTAATTCACTAAGGCCAAAGTCAAATTCTGAGATCCGTGGTGTACCTTGGATTCCAAACCTTGGAACTGAAACAATTTCATGGGATATCCTAAACCTTAAGAAGGAGAATTACTTCTCATGTGCTGTCGGGCGAACTCAATCGACTGCTAGGTATATGCTTGGATCATCATCAGATGATGTTGTTGCTTTTCTGAAGAAACTGGCAGGCGCGTCTTTGAACTCTTTATCCTCCACTTAA 2679 0.4304 MVRFRIDHSAGNKYNGCDNSHYFPSRAEGVLRESELSSKVSHLNKSNGYNHGGPFRQRLLVVANRLPVSAVRTSEGSWSMEMSAGGLVTALLGLKEFEAIWIGWAGVNVSDEIGQKTLAKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLLHYLGLPQEDRLATTKNFQSQFEAYKKANQMFADVVKKHYQEGDVVWCHDYHLMFLPKFLKDYDRNMKVGWFLHTPFPSSEIHRMLPSRSELLHSVIAADLVAFHTYDYARHFVSACTRILGLEGTPKGVEDQGRLTRVTAFPIGIDSDRFVRALELPQVKDSIKEFEERFRGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAYWRDKVVLVQIAVPTRTDVLEYQKLTSQVHEIVGRINGRFGTLTAVPVLHLDRSLEFHKLCALYAVTDVALVTSLRDGMNLVSYEYVACQERKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIDQALNMPSEEREKRHAHNFSHVKTHTAQEWAGTLVSELNETVAEQQRRTRQAPAPLPTKDAVEHYLQSTNRLIILGFNGCLTEPVGKKGGQIKEMELNVHPELKQPLTELCSDPNTTIIVLSGSDRIVLEENFREYDLWLAAENGMFIHHAKGKWMSTMPELLNMEWVDSVKHVIEYFTERTPRSHFEERATSIVWNYKYADVEFGRLQARDMLQHLWTGPISNAPVDVIHGSRSVEIRAVGVTKGAAMDRILGHIVHCKSMTSPFDYVLCIGHFLAKDEDVFTFFEPSSPSTDSDLPRAKETDRVEFCAEKRLPSKTPASKSGPKASQSNSLRPKSNSEIRGVPWIPNLGTETISWDILNLKKENYFSCAVGRTQSTARYMLGSSSDDVVAFLKKLAGASLNSLSST 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1420 892 Gene3D - 645 725 - -
Prci6g1420 892 Pfam Trehalose-phosphatase 578 775 IPR003337 GO:0003824|GO:0005992
Prci6g1420 892 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 58 523 IPR012766 GO:0003825|GO:0005992
Prci6g1420 892 Gene3D Glycogen Phosphorylase B; 305 508 - -
Prci6g1420 892 Gene3D Glycogen Phosphorylase B; 50 304 - -
Prci6g1420 892 Pfam Glycosyltransferase family 20 58 523 IPR001830 GO:0003824|GO:0005992
Prci6g1420 892 Gene3D - 579 767 IPR023214 -
Prci6g1420 892 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 50 882 IPR001830 GO:0003824|GO:0005992
Prci6g1420 892 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 305 508 - -
Prci6g1420 892 SUPERFAMILY HAD-like 555 882 IPR036412 -
Prci6g1420 892 CDD HAD_TPP 556 772 - -
Prci6g1420 892 CDD GT20_TPS 58 523 IPR001830 GO:0003824|GO:0005992
Prci6g1420 892 MobiDBLite consensus disorder prediction 805 822 - -
Prci6g1420 892 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 50 304 - -
Prci6g1420 892 MobiDBLite consensus disorder prediction 795 823 - -
Prci6g1420 892 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 645 725 - -
Prci6g1420 892 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 57 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1420 Prci-Chr6 10994195 11006012 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1420 11 885 Trehalose Biosynthesis Gene Families AT1G78580 69.497 0.0 1322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1420 K16055 - qsa:O6P43_001098 1377.07