Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1407 ATGGACACAAGTATGACTCCAACAGTTGGTCTTGAATTTGATGATCTAGAAGAGGCATGGCAATATTGGATTGACTATGGTGGAAGAATAGGATTCAGTGTTAGAAAGCAAAACTCTAATAAGAGCAAGAAGGATGATTCTATCATATATTGCAAATATGTTTGTTCCAAGGAGGGAGTGAAAAAAGCAGATAAAAGAGACTTTAAAACTAAGAAGCCTCGAAAGGAAACAAGAACAGGGTGTGAAGTGAAAATGATAATTAAAAAGGTGAATGAAAGATTTAGAGTTAGTGAACTATTTTTGGACCATAATCACCCTTTAGAGCCCCCAGAGACTATTCATTTATTAGCATCACAAAGGAGATTACCGAAAGCACAAGGCTATGCTTTGGAGGTTGCTGAAGATACGGGGATTAAGCAAAAAGCCTCTTTTAATTTAATGAGCAAATATGCAGGAAGGAGGGCTAATTTGGGGTATACCAAAGAGGAGGTAAAGAGTTATCTAAGATCAAGGAGGCAACGAGACATGATCTATAGTGAAGCTGGGTTTTTACTTCGCTATTTCCAACAACAATTGACAGAAAATCCTTCATTTTTTCATGCTTATCAAATGGACTCAGAAGAGCAGATAACTAATGTGTTTTGGGCTGATGCACATATGTTGATAGATTATGATTGTTTTGGGGATGTCATTTTATTTGATACAACATACTCTACAAATCGTGACAACAGACCACTTGCCATTTTCTCAGGTTTCAACCATTACAGAGAAGTAGTGATATTTGGTGTTGCTTTATTATATGATGAGACTATTGAGTCTTTTAAATGGCTTTTTGAAACCTTTTTACAAGCACATAAGCAAAAAATGCCATTTACTATGTTTACTGACTAA 891 0.3569 MDTSMTPTVGLEFDDLEEAWQYWIDYGGRIGFSVRKQNSNKSKKDDSIIYCKYVCSKEGVKKADKRDFKTKKPRKETRTGCEVKMIIKKVNERFRVSELFLDHNHPLEPPETIHLLASQRRLPKAQGYALEVAEDTGIKQKASFNLMSKYAGRRANLGYTKEEVKSYLRSRRQRDMIYSEAGFLLRYFQQQLTENPSFFHAYQMDSEEQITNVFWADAHMLIDYDCFGDVILFDTTYSTNRDNRPLAIFSGFNHYREVVIFGVALLYDETIESFKWLFETFLQAHKQKMPFTMFTD 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1407 296 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 296 IPR031052 GO:0006355
Prci6g1407 296 Pfam FAR1 DNA-binding domain 22 108 IPR004330 -
Prci6g1407 296 Pfam MULE transposase domain 230 296 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1407 Prci-Chr6 10672244 10673134 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci6g1407 FAR1 1.2e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1407 - - pcin:129316824 576.63