Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1396 TTATGCTGTTGTCAAATTTCCAATACATTCTCAAGTGAAGGCCCAGGAGAATGCAGTTTGAAATTGGATTGGCCAACAAGACAAAAGATTTGTATTGCTATTGCCAGAGGTTTGGCTTTTCTCCATGAAGAATCGAGACTGAAAATTGTTCACAGGGACATCAAGGCCACTAATGTGCTGCTTGACAAAAACTTGAATGCAAAAATATCAGACTTTAGATTGGCTAAGCTTTATGAAGGGGAAAATACCCACATAAAGCACACGAATAGCTGGGACCTAGAAAATGTTTTGAAAGAGGATGGCTATCTAGTGGAGCTAGTTAATCCAAGGTTGGGTTCAGAATTTGACAGGAAGGAGGTAATGGTGATGATCAACGTGGCTCTCCTATGCACTAATCCATCTTCATCACTGAGGCCCCCCATGTCTTCAGTGCTAAGCATGCTTGAAGGCAGAACTGTTGTTCCAGAGTTCGTTTCTGATCAAAGTGAGGAAGCGAATATGATGTGA 507 0.4162 LCCCQISNTFSSEGPGECSLKLDWPTRQKICIAIARGLAFLHEESRLKIVHRDIKATNVLLDKNLNAKISDFRLAKLYEGENTHIKHTNSWDLENVLKEDGYLVELVNPRLGSEFDRKEVMVMINVALLCTNPSSSLRPPMSSVLSMLEGRTVVPEFVSDQSEEANMM 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1396 168 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 94 162 - -
Prci6g1396 168 FunFam Os07g0541700 protein 15 92 - -
Prci6g1396 168 Gene3D Transferase(Phosphotransferase) domain 1 12 90 - -
Prci6g1396 168 Pfam Protein kinase domain 27 100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1396 168 ProSitePatterns Serine/Threonine protein kinases active-site signature. 49 61 IPR008271 GO:0004672|GO:0006468
Prci6g1396 168 Gene3D Transferase(Phosphotransferase) domain 1 91 165 - -
Prci6g1396 168 SUPERFAMILY Protein kinase-like (PK-like) 21 156 IPR011009 -
Prci6g1396 168 ProSiteProfiles Protein kinase domain profile. 1 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1396 Prci-Chr6 10446838 10448316 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1396 20 167 Receptor kinase-like Gene Family AT1G53430 50.495 1.18e-49 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci6g1396 Pkinase 1.9e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1396 - - pcin:129313380 340.117