Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1395 ATGGGGGAATTAACCTGTATTGGCCGTGTCTGCACTCCTCTTGTAGAATGCATAACACTGCACGCACAAAATCTCACCGGCAAACTTCCTCCAGAACTTGTCAGATTACCTTACCTTAACCTGATTGACCTGACCCTCAATTACCTTAATGGCCCAATCCCTTCAAGCTGGGCCTCCCTTAAGCATCTCATCTACATTTCTCTTCCTAGTAACCGTCTAACGGGTCCGATCCCAGTGGAGCTAACGAAGATCACGACTCTGCAAACTTTGATCCTCTCGTACAATCAATTTTCTGGAAATCTTCCTGCTGAGCTTGGCAATCTTCCCCAGCTTGAACGATTGCTTCTCACCTCCAACAACTTCACAGGAGAAATACCTTCAACTTTTGCAAAGCTTACAAGGTTGAAGGACGTCCATTATTGTCATTCCACTCCGAGTACTTATCAGTTAGCTCCCTGTGGTATTTCCGTTTATAATTCTAACCTTATTTTTCTTTATACGAGAAAGTTTAGAATAGTTAAAGGGACTGGTTTAAGTGGACCGATACCGTCAGGAATTTCGTTTCTTGGAAACTTAATTCACTTGAGTATAAGTGACTTGAATGGACTTGATTCAACTTTTCCTCTACTTAACAATTCCAGAAAATTGCGAGGATTGACATTGAGGAGTCGCAGTATCAATAACGCGATACCTGACTATCTCGGGGAAATGACCTATTTATCTAGGCTAGACCTGAGCTTTAACAAATTGAATGGAGGGATTCCTGAAACGCTTGGTCACCTATCAAGAATGGATAACATGTATTTAACTGGAAACCTTCTGCAGGACCTTTGCCTGAGTGGTCGGAGAGAGTTACATACATTGTCGTCAGCGAAATGTGTTAGAGTTTTTGCATTTGTCGAGATTGCGTACAATTTTAAGAAGCTATCTGGGGCTTATCCATCTTTTACAAGCCACAGGAACTTGTTTGGAGATCCTTTGATGGCCAATACCTCAGGATCTGTTTCTTGTATGAAAACCACTGTTTGTTCCAAAACATGGCACTCTGTCAGTATAAATTGTGGTTAGAGATCAGAAACCATTGGAGATACAATGTATGATGGTGATTTGGATCCTGCTGGACCAGCAAGGTTTGGAGAGAGTAGGAGAAACTGGGCATTCAGCAGTACTGGTGACTCTTATGATCATTGTAACAAGTTTGCCTATATTGCAGAAAACATATATAATCTCTCTATACCCAATGTTAAACTGTATAGGAATGCACGTCTTTCCCCTATGTCTCTGACTTATTATGGATTCTGCCTGGGAAATGGACCGTATACAGTGAGTCTCCATTTTGTGGAGATAATGTTGACTGATGACAAAACTTTCGGCAGCCTTGGAAGGCGCGTATTTGACGTCTACATTCAGCTCTTGTATCAAGCAGACTTTAAACCCCCAAGAAGCAAACCTAGTATGGTTGTGGCTGCAATAGTGGCTACGGGAGTGATTATAGTCATCTTGGCATTGGCCATGCTCTGGTGGAGATGTTCTCTGGGAAAGAGAAGCTCATTAGCAGTAGAGCTAAAGGGCTTAGATCTGCAAGCTGGTTTGTTTACCTTGCGCCAAATCAAGGCAGCAACAAATAACTTTGATGTATCCAGTAAGATTGGAGAAGGAGGATTTGGTTCAGTTTACAAGGGCTTTCTAGCAGATGGCACAATGATAGCAGCCAAGCAGCTTTCTTCAAAGTCAAATCAAGGAAACCGTGAGTTCCTAAATGAGATAGGCATGATCTCTGCTTTGAAACACCCTAGTCTTGTCAAACTCTATGGTGGTTGTGTTGAGGGAGATCAGTTGTTGCTGGTATATGAATACATGGAAAACAATAGCCTCGGTCGTGCCTTGTTTGGCAATTTGTTTGTATTTACTTCCCATATATATGTGTATACGCATGTATATTTGCTTGTGTGA 1953 0.4194 MGELTCIGRVCTPLVECITLHAQNLTGKLPPELVRLPYLNLIDLTLNYLNGPIPSSWASLKHLIYISLPSNRLTGPIPVELTKITTLQTLILSYNQFSGNLPAELGNLPQLERLLLTSNNFTGEIPSTFAKLTRLKDVHYCHSTPSTYQLAPCGISVYNSNLIFLYTRKFRIVKGTGLSGPIPSGISFLGNLIHLSISDLNGLDSTFPLLNNSRKLRGLTLRSRSINNAIPDYLGEMTYLSRLDLSFNKLNGGIPETLGHLSRMDNMYLTGNLLQDLCLSGRRELHTLSSAKCVRVFAFVEIAYNFKKLSGAYPSFTSHRNLFGDPLMANTSGSVSCMKTTVCSKTWHSVSINCGXRSETIGDTMYDGDLDPAGPARFGESRRNWAFSSTGDSYDHCNKFAYIAENIYNLSIPNVKLYRNARLSPMSLTYYGFCLGNGPYTVSLHFVEIMLTDDKTFGSLGRRVFDVYIQLLYQADFKPPRSKPSMVVAAIVATGVIIVILALAMLWWRCSLGKRSSLAVELKGLDLQAGLFTLRQIKAATNNFDVSSKIGEGGFGSVYKGFLADGTMIAAKQLSSKSNQGNREFLNEIGMISALKHPSLVKLYGGCVEGDQLLLVYEYMENNSLGRALFGNLFVFTSHIYVYTHVYLLV 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1395 650 Pfam Malectin domain 350 470 IPR021720 -
Prci6g1395 650 Gene3D Ribonuclease Inhibitor 6 143 IPR032675 -
Prci6g1395 650 ProSiteProfiles Protein kinase domain profile. 544 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1395 650 FunFam Leucine-rich repeat receptor protein kinase EMS1 53 146 - -
Prci6g1395 650 SUPERFAMILY Protein kinase-like (PK-like) 527 637 IPR011009 -
Prci6g1395 650 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 513 619 - -
Prci6g1395 650 Pfam Protein kinase domain 545 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1395 650 SUPERFAMILY L domain-like 15 279 - -
Prci6g1395 650 Gene3D Phosphorylase Kinase; domain 1 511 619 - -
Prci6g1395 650 Gene3D Ribonuclease Inhibitor 158 330 IPR032675 -
Prci6g1395 650 ProSitePatterns Protein kinases ATP-binding region signature. 550 572 IPR017441 GO:0005524
Prci6g1395 650 Gene3D - 348 476 - -
Prci6g1395 650 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 15 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1395 Prci-Chr6 10438371 10447304 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1395 20 631 Receptor kinase-like Gene Family AT1G53420 41.618 4.43e-146 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci6g1395 Malectin 7.6e-16 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1395 - - pcin:129313847 1287.32