Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1394 ATGAAGCCACCAAAGTTACGTTATAGCAGTATCATGAAGATAATTACTTTCCCTCATCATCACCTCTTTCTCCTGATGATCTCTCTTTTCTGGGCTTCTTCTGCATTTGGAGCCACCAAGATACATCCATCTGAAATGGAAGCTCTGAAAGACATAGCTAAGACACTTGGGAAGACAGACTGGAACTTCAGCATAGATCCATGCGATACGCCATCTGCAGTCCAGAGCAGCTGGTTTACGCCAAACCCAGTCGATAAAGAAAGTCAAAACGCTGTCGTCTGCAATTGCACCCTTGCCAATGACAGCTTCTGTCATGTTGTCAACATAACTTTGAAGAAACAAAGTCTCCCGGGCAAACTCCCGCCAGAACTCGTCAGATTATCTTACCTTTCCATAATCGACCTGAGCCGCAACTACCTTAGCGGTTCAATCCCTTCTAGTTGGGCCTACCTTAAACTTGTGCACATTTCTCTTCTTGGTAACCGACTAACGGGTAGAATCCCAGTGGAGCTTACGAAGATCACTACTCTGCAGCGTTTGGTCCTCGAGTTCAATCAATTTTATGGAAATCTTCCTCCTGAGCTTGGCAATCTTCGCTATATTGAAGGACTGCTTCTTACCTCCAACAACTTCACTGGAGAAATACCTTCAACTTTCGCAAACCTCACTACGTTGACGGATATTCGACTAGGTGACAATCAATTCTCTGGAAAGATGCCTAGCTTTATTCAGAACTGGAAAAGTCTTGAGACAATAGTGGCTCAAGGGAGTGGTTTGAGTGGACCCATTTCTGGAATTTCATTTCCGGAAAACTTAAAACTGTTGACGATAAGTGACTTGAATGGACCTGATTCAACTTTTCCCGCACTCAATAATTTGACAAAATTGAAATCATTGATATTGAGGAGTTGCAATATCATTGGAAAGATACCTCCCTCTCTTGGGAGCATGGGCAATTTAAAAATCTTAGACCTGAGCTTTAACAAATTGCAAGGAAAAATTCCAGATACCTTTTCTCACCTCTCACAAACGGATGACATGTATTTAACTGGAAACTTTCTCGATGGACCTGTGCCTGCGTTGAACAAAGTTGAATACGTGGATCTTTCATACAACAACTTTTCCAGCAGAGACACTGGGGGGAGGTGTGATCGATCAAATGTGAACCTGTTTGGAGACTCTTTGACGGTCAATGACTCAGGATCTGTTACTTGTATGAGAAGCCCTTGTTCTAAAACCTGGTACTCTGTCAATATAAATTGTGGTGGAAAAGCTGGCACCTTTGAAGGTAAAATGTATGATGGTGATTTGGATCTAGCTTCACGAGGATTTGCAAAAAGTGGAACAAACTGGGCAATTAGCAATACTGGTCACTTTATAGATGCAAGACGAAAGTATACCTACATCGCAGAAAGCAATAGTCTCCCTTTGCCCAATGTTGAACTGTATGGGAATGCACGTCTTTCCCCTATTTCTCTGACCTATTATGTATTTTGCCTGGGAAATGGACCGTACACAGTGAGTCTTCATTTTGTGGAGATAGTGTTCACTGATGATCAAACATATAGAAGCCTTGGAAGGCGTGTATTTGATGTCTACATTCAGGGAAAGCGAATGCTGAAGGATTTCAATATTGTAAATGAAGCAGGGGGAGCTGGTAAGCTAATTGTAAGAAATTTTACTGTAAATGTGACTAGTGGCACCTTAGAGATTCGCTTCTCTTGGGCTGGGAAAGGGACAACTGCTATACCGGAAAAGTCAGTTTATGGTCCTTTAATTTCAGCTATATCTGTAACTTCTGACTTTAAACCCCCAAGAAGCATGCCTGGAGCAGTTGTGGCTGCAATTGTGGCTGCAGGAGTGAGTATTGTCATCCTGATACTGGGCATGCTCTGGTGGAGAGGTATCCTAGGAAAAAGAAGTTCGTTAGCAATAGAGCTAAAGAGCTTAGATCTACAAACTGGTTCGTTTACCTTGCGCCAAATCAAAGCAGCAACAAATAACTTCGATGCATCTAATAAGATTGGAGAAGGAGGATTTGGTTCTGTTTACAAGGGCTTTCTATCAGATGGCACAATGATAGCAGTGAAGCAGCTTTCTTCTAAATCAAAACAAGGAAACCGTGAGTTTATAAATGAGATAGGCATGATCTCTGCTTTGCAACACCCTTGTCTTGTTAAGCTCCATGGTTGTTGTGCTGAGGGGGATCAGTTGTTGCTGGTGTATGAATACATGGAAAACAACAGCCTTGCTCGTGCCTTGTTTGGACCAGAAGAATGCCGTTTAAAATTGGATTGGCCAACAAGACAGAAGATTTGTGTTGGTATTGCCAGAGGTTTGGCTTTCCTCCATGAAGAATCAAGACTAAAGATTGTTCACCGGGACATCAAGGCCACTAATGTGCTACTTGACAAAGACCTGAATGCAAAAATTTCTGATTTTGGACTCGCGAAGCTTGATGAAGAGGAAAATACCCACATAAGCACTCGAATAGCTGGGACCTATGGATATATGGCACCTGAATATGCAATGCATGGTTATTTGACTGACAAAGCAGATGTCTATAGTTTTGGAATTGTTGCCTTGGAAATTGTAAGTGGAAGGAGTAACACTTATCGCAGACAAAAGGAAGACTGTTTCAATCTTCTTAATTGGGCACATGTTTTGAAAGAGAATGACTATTTAATGGAGCTCGTTGATCCAAGGTTGGGTTCAGATTTTAACAGGGAAGAGGTAATGGTGATGATCAATGTGGCTCTTCTATGCACTAATCCCTCTTCATCATTGAGGCCCCCCATGTCTTCTGTCCTAAGCATGCTTGAAGGCAGGACTGTAGTTGCCGAGTTCATTTCCGATCAAAGTGTGGAAACAAGCAAGATGAAGTTAGAGACAACGAGACAATATTACCGACAGATAGAAGAAAATCAGACAAATGATGAGACTGAAACTCATTCTCAGAGTCTGTTAGGAATGTCCACTTCTTCATCCACATCAGCTAGAGATCTCTATCCTGTTCGCCTAGATTCTTCCTACTTGGAGAAAAGAAAGTCTGACAGGATAGGCTAA 3066 0.4207 MKPPKLRYSSIMKIITFPHHHLFLLMISLFWASSAFGATKIHPSEMEALKDIAKTLGKTDWNFSIDPCDTPSAVQSSWFTPNPVDKESQNAVVCNCTLANDSFCHVVNITLKKQSLPGKLPPELVRLSYLSIIDLSRNYLSGSIPSSWAYLKLVHISLLGNRLTGRIPVELTKITTLQRLVLEFNQFYGNLPPELGNLRYIEGLLLTSNNFTGEIPSTFANLTTLTDIRLGDNQFSGKMPSFIQNWKSLETIVAQGSGLSGPISGISFPENLKLLTISDLNGPDSTFPALNNLTKLKSLILRSCNIIGKIPPSLGSMGNLKILDLSFNKLQGKIPDTFSHLSQTDDMYLTGNFLDGPVPALNKVEYVDLSYNNFSSRDTGGRCDRSNVNLFGDSLTVNDSGSVTCMRSPCSKTWYSVNINCGGKAGTFEGKMYDGDLDLASRGFAKSGTNWAISNTGHFIDARRKYTYIAESNSLPLPNVELYGNARLSPISLTYYVFCLGNGPYTVSLHFVEIVFTDDQTYRSLGRRVFDVYIQGKRMLKDFNIVNEAGGAGKLIVRNFTVNVTSGTLEIRFSWAGKGTTAIPEKSVYGPLISAISVTSDFKPPRSMPGAVVAAIVAAGVSIVILILGMLWWRGILGKRSSLAIELKSLDLQTGSFTLRQIKAATNNFDASNKIGEGGFGSVYKGFLSDGTMIAVKQLSSKSKQGNREFINEIGMISALQHPCLVKLHGCCAEGDQLLLVYEYMENNSLARALFGPEECRLKLDWPTRQKICVGIARGLAFLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEEENTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGRSNTYRRQKEDCFNLLNWAHVLKENDYLMELVDPRLGSDFNREEVMVMINVALLCTNPSSSLRPPMSSVLSMLEGRTVVAEFISDQSVETSKMKLETTRQYYRQIEENQTNDETETHSQSLLGMSTSSSTSARDLYPVRLDSSYLEKRKSDRIG 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1394 1021 Pfam Protein tyrosine and serine/threonine kinase 672 893 IPR001245 GO:0004672|GO:0006468
Prci6g1394 1021 SUPERFAMILY L domain-like 100 358 - -
Prci6g1394 1021 MobiDBLite consensus disorder prediction 972 1001 - -
Prci6g1394 1021 Gene3D - 414 602 - -
Prci6g1394 1021 Gene3D Transferase(Phosphotransferase) domain 1 745 964 - -
Prci6g1394 1021 CDD STKc_IRAK 675 942 - -
Prci6g1394 1021 Gene3D Ribonuclease Inhibitor 279 413 IPR032675 -
Prci6g1394 1021 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 47 215 - -
Prci6g1394 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 791 803 IPR008271 GO:0004672|GO:0006468
Prci6g1394 1021 ProSiteProfiles Protein kinase domain profile. 669 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1394 1021 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 24 975 - -
Prci6g1394 1021 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 414 601 - -
Prci6g1394 1021 Gene3D Ribonuclease Inhibitor 42 278 IPR032675 -
Prci6g1394 1021 FunFam Putative LRR receptor-like serine/threonine-protein kinase 745 952 - -
Prci6g1394 1021 Gene3D Phosphorylase Kinase; domain 1 637 744 - -
Prci6g1394 1021 SMART serkin_6 669 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1394 1021 Pfam Leucine rich repeat 295 352 IPR001611 GO:0005515
Prci6g1394 1021 SUPERFAMILY Protein kinase-like (PK-like) 653 958 IPR011009 -
Prci6g1394 1021 Pfam Malectin domain 416 596 IPR021720 -
Prci6g1394 1021 ProSitePatterns Protein kinases ATP-binding region signature. 675 697 IPR017441 GO:0005524
Prci6g1394 1021 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 638 744 - -
Prci6g1394 1021 MobiDBLite consensus disorder prediction 981 1001 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1394 Prci-Chr6 10418841 10430360 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1394 29 999 Receptor kinase-like Gene Family AT1G53420 52.995 0.0 974
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci6g1394 PK_Tyr_Ser-Thr 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1394 - - qsa:O6P43_001072 1256.12