Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1392 ATGGAGTTAGTGATTTCAAGCTCTAAACTTGTCTGTGTTTTCGCATTGGGATTCTTCGCTTTGAATGCCTTCACGCACTGTGGATCCAACGCTCAACAGATACCAGATGATGAAGTGAAAGTTCTAGAAGCAATATCATCGAAGATAGATAATTTGAATTGGAAGGTGGGCCCAAGTTCTTGTGTGGATGGAGGCTTCAAAAATGAGAGCATTGTGGGGAACGACATCATTAGGAATGTTACATGCAATTGCACTTTCTCCGCCGGAAAAGTTTGCCACGTCACACATATCCAGCTGAAAGGTCTTAATCTATCTGGAGTTATACCAAGTGAATTTGGCAATCTTACCCAACTGCAAGAAATTGATTTGACTCGAAACTATCTGAATGGCACAATCCCAAAGAGCTTTGCTAGACTCCCTCTTGTTATAGTATCCCTCCTGGCTAATCGAATCAGTGGTCCAATTCCGGAGGAAATCGGTGATATTTCAACTTTGGAGGAGCTGGTGTTGGAAGATAATCTGTTACAAGGAACTCTTCCTTCTAGTCTCGGAAAATTGAAGCAGTTACGCAGATTGCTTCTTTCATCAAATAATTTCTCAGGGACGATACCTGAAAGTTTTGGCAATTTAAAGAAACTAGAAGATTTTAGATTAGATGGAAACAACATGTCAGGAAAATTACCCAGTTTTATTGGAAACTGGACCAATCTTGATAGATTGGATTTGCAGGGAACATCCATGGAAGGCCCAATTCCTCCAACCATAGCTTTGTTAACGAATTTGACTCAGTTGAGAATAACTGATTTGAATGAGATGACAACAATGAGATTTCCTGATATAGAGAATTTGAAATCCTTGAAACAATTGGTGTTGAGAAATTGCTCAATCACTGGTTCCATTCCAAATTACATTGGTCAAATGGAAGACTTGGTTGCTTTAGATTTGAGCTTCAACAAGTTGAGTGGTAGGATCCCTAGTGAAATACAGGACTTGACAAGACTAGATTACATGTTTTTGACTGAAAATTCTTTGAGTGGAGATATTCCAGGATGGATATTAGCAAACAAAAATAACTTGGATTTATCTTACAACAATTTTTCAAAGACTTCTGCTAAGATTTGCCAGTTCAAGGATGTAAACTTGGCTTCAAGCCTATCATCTTCAGCAGAGACCTCAATTACTTGCTTGAAAAAGGACCTTCCTTGTGGGGGAAAACCTAAGTATCATTCATTGTTCATAAACTGTGGAGGATCAGAAATTGAATATGAGGGGAATAAGTATGAAACTGACCTTAATCCAGAGGGTATATCATTCTTTAGTCCTTCTGGCGACAAATGGGCTTATAGCAGCACAGGATCATACTTAGGAAACACTAAAGCTGATTTTATTGCAAAAAATACATTTTCTCTCAACATTACTGGCCCCAGCTTCTACAAAACAGCTCGCCTTTCTCCTTTGTCTCTCAAGTATCATGGCCTCTGTTTGCTTAATGGAAATTACAATGTCAAGCTTCACTTTGCTGAGATTATGTTTTCTAATGACCAGAAATTCAGCAGTCTTGGAAGGCGCATATTTGATGTTTCAATTCAAGGTAGGAAGTATTTGAGTGATTTTAACATAATGGAGGCAGCTGGTGGTGTTGGTAAGGGCATTTTCAGGGACTTCAACGTTGATGTTAGGGATAACTCCTTGGAAATCCATTTATATTGGGCTGGGAAAGGAACAACAGCTATTCCTGATAGAGGTGTATATGGACCTCTTATATCTGCTATTTCAGTCACCCCAAACTTTCAAATTCCTTCAGAAGGGCTTTCTGCTGGAGCCATTGCTGGAATTGTGGCTGGATCATGTGTGATCCTCATACTGATACTGATTGTCCTTCGAAAGATGGGTTTCTTAGGTGGGAAAGATCCAAAAGACAAAGAACTATTAGATCTGAAAACGGGTTATTTCTCCTTAAAACAAATCAAAGCTGCCACTGATAACTTTGCCCCAGAAAATAAGATTGGTGAAGGAGGTTTTGGACCAGTGTATAAGGGCGTACTATCAGATGGTGCTGTCATAGCTGTGAAGCAACTCTCCTCAAAATCAAAGCAAGGGAATCGGGAATTTGTTAATGAAATAGGAATGATTTCTGCTTTGCAACATCCAAATCTTGTGAAGCTTTATGGCTGCTGCATTGAAGGAAACCAGCTATTGTTGATATATGAGTACATGGAAAATAACAGTCTTGCTCGTGCTCTTTTTGGTCGCCCAGAACAGAAATTACACTTGGATTGGCCTACAAGAATGAAAATCTGTGTAGGGATTGGAAGAGGATTAGCTTATCTACATGAAGAATCAAGGTTGAAAATTGTACATAGGGATATCAAGGCAACAAATGTCTTACTTGACAAAGGCTTGAATGCTAAGATCTCTGACTTTGGTTTAGCCAAGCTTGATGAAGAAGAGAATACCCATATCAGCACAAGAATAGCAGGAACAATTGGTTATATGGCTCCTGAATATGCCATGCGAGGATACCTGACTGACAAAGCAGATGTTTATAGTTTCGGAGTTGTTGCTTTAGAGATTGTGAGTGGAAAAAGCAACACAAATTACAGGCCCAAGGAGGAGTTTGTTTATCTTCTTGATTGGGCCTATGTTCTTCAAGAGCAAGGAAACCTTCTTGAGTTGGTGGATCCAAGTCTTGGTTCAAGCTATTCCTCACAGGAAGCCATGAGAATGCTGGAGTTGGCACTCTTATGTACTAACCCATCTCCAACTCTTAGGCCACCCATGTCCTCTGTGGTTAGCATGCTTGAAGGAAAATTGCCGATCCAAGCACCGATAATCAAGTGCCGGGAGGGTGACCAGGATGCAAGATTCAAAGCCTTTGAGATGCTATCACTAGACAGCCACAGCCAAACCTTTGTTTCTTCTACAGTTTCACAAGAAAGCATGGAGCAAAGAGTCCAATCAATGGGTCCATGGGGTGATTCCTCTGTTTCTCTTCCAAGTAAAGATTGCTCTTCATCTGATAGGCTTCTTAGGGATTCCAATGTATAA 3048 0.4012 MELVISSSKLVCVFALGFFALNAFTHCGSNAQQIPDDEVKVLEAISSKIDNLNWKVGPSSCVDGGFKNESIVGNDIIRNVTCNCTFSAGKVCHVTHIQLKGLNLSGVIPSEFGNLTQLQEIDLTRNYLNGTIPKSFARLPLVIVSLLANRISGPIPEEIGDISTLEELVLEDNLLQGTLPSSLGKLKQLRRLLLSSNNFSGTIPESFGNLKKLEDFRLDGNNMSGKLPSFIGNWTNLDRLDLQGTSMEGPIPPTIALLTNLTQLRITDLNEMTTMRFPDIENLKSLKQLVLRNCSITGSIPNYIGQMEDLVALDLSFNKLSGRIPSEIQDLTRLDYMFLTENSLSGDIPGWILANKNNLDLSYNNFSKTSAKICQFKDVNLASSLSSSAETSITCLKKDLPCGGKPKYHSLFINCGGSEIEYEGNKYETDLNPEGISFFSPSGDKWAYSSTGSYLGNTKADFIAKNTFSLNITGPSFYKTARLSPLSLKYHGLCLLNGNYNVKLHFAEIMFSNDQKFSSLGRRIFDVSIQGRKYLSDFNIMEAAGGVGKGIFRDFNVDVRDNSLEIHLYWAGKGTTAIPDRGVYGPLISAISVTPNFQIPSEGLSAGAIAGIVAGSCVILILILIVLRKMGFLGGKDPKDKELLDLKTGYFSLKQIKAATDNFAPENKIGEGGFGPVYKGVLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYMENNSLARALFGRPEQKLHLDWPTRMKICVGIGRGLAYLHEESRLKIVHRDIKATNVLLDKGLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLGSSYSSQEAMRMLELALLCTNPSPTLRPPMSSVVSMLEGKLPIQAPIIKCREGDQDARFKAFEMLSLDSHSQTFVSSTVSQESMEQRVQSMGPWGDSSVSLPSKDCSSSDRLLRDSNV 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1392 1015 Gene3D Phosphorylase Kinase; domain 1 635 738 - -
Prci6g1392 1015 Gene3D - 409 596 - -
Prci6g1392 1015 Gene3D Transferase(Phosphotransferase) domain 1 739 942 - -
Prci6g1392 1015 Pfam Malectin domain 411 591 IPR021720 -
Prci6g1392 1015 Pfam Leucine rich repeat 164 222 IPR001611 GO:0005515
Prci6g1392 1015 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 203 270 - -
Prci6g1392 1015 CDD STKc_IRAK 669 936 - -
Prci6g1392 1015 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 278 369 - -
Prci6g1392 1015 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 25 967 - -
Prci6g1392 1015 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 408 596 - -
Prci6g1392 1015 SUPERFAMILY Protein kinase-like (PK-like) 647 935 IPR011009 -
Prci6g1392 1015 MobiDBLite consensus disorder prediction 982 1015 - -
Prci6g1392 1015 Pfam Protein tyrosine and serine/threonine kinase 666 932 IPR001245 GO:0004672|GO:0006468
Prci6g1392 1015 MobiDBLite consensus disorder prediction 982 1004 - -
Prci6g1392 1015 FunFam Putative LRR receptor-like serine/threonine-protein kinase 739 946 - -
Prci6g1392 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 785 797 IPR008271 GO:0004672|GO:0006468
Prci6g1392 1015 SMART serkin_6 663 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1392 1015 Gene3D Ribonuclease Inhibitor 194 398 IPR032675 -
Prci6g1392 1015 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 38 202 - -
Prci6g1392 1015 ProSiteProfiles Protein kinase domain profile. 663 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1392 1015 SUPERFAMILY L domain-like 84 367 - -
Prci6g1392 1015 Gene3D Ribonuclease Inhibitor 52 193 IPR032675 -
Prci6g1392 1015 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 635 738 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1392 Prci-Chr6 10367591 10378426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1392 18 1004 Receptor kinase-like Gene Family AT1G53440 61.914 0.0 1221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci6g1392 PK_Tyr_Ser-Thr 1.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1392 - - gmx:100815226 1410.59