Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1352 ATGGCAGGGATTGGACCACTTTCACAGGATTGGGAGCCCGTGGTGATCCGGAAGAAGGCACCTACAGCGGCGGCGAAGAAGGATGAGAAAGCTGTCAACGCCGCTCGTCGATCCGGCGCCGATATTGAAACCGTAAAAAAATTTAATGCTGCGACAAATAAAGCTGCCTCCAGCAGCACTTCTTTGAACACAAGGAAGCTTGATGAAGAAACTGAGAATCTTCATCATGAACGGGTACCAACTGAATTAAAGAAAGCCATCATGCAGGCTCGGATGGACAAAAAGCTTACCCAGGCTCAACTAGCTCAGATGATAAATGAGAAGCCTCAAATTATTCAGGAGTATGAATCAGGTAAAGCCATTCCAAATCAACAAATATTAGGTAAACTGGAGAGAGCTCTTGGTGCAAAACTGCGTGGAAAGAAATGA 429 0.4569 MAGIGPLSQDWEPVVIRKKAPTAAAKKDEKAVNAARRSGADIETVKKFNAATNKAASSSTSLNTRKLDEETENLHHERVPTELKKAIMQARMDKKLTQAQLAQMINEKPQIIQEYESGKAIPNQQILGKLERALGAKLRGKK 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1352 142 SMART mbf_short4 86 141 IPR001387 -
Prci6g1352 142 Gene3D - 71 142 IPR010982 GO:0003677
Prci6g1352 142 SUPERFAMILY lambda repressor-like DNA-binding domains 81 138 IPR010982 GO:0003677
Prci6g1352 142 MobiDBLite consensus disorder prediction 21 39 - -
Prci6g1352 142 Pfam Helix-turn-helix 87 137 IPR001387 -
Prci6g1352 142 ProSiteProfiles Cro/C1-type HTH domain profile. 87 141 IPR001387 -
Prci6g1352 142 MobiDBLite consensus disorder prediction 50 64 - -
Prci6g1352 142 FunFam Multiprotein bridging factor 1 71 142 - -
Prci6g1352 142 MobiDBLite consensus disorder prediction 50 78 - -
Prci6g1352 142 CDD HTH_XRE 85 135 IPR001387 -
Prci6g1352 142 Pfam Multiprotein bridging factor 1 9 79 IPR013729 -
Prci6g1352 142 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 3 142 - -
Prci6g1352 142 MobiDBLite consensus disorder prediction 20 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1352 Prci-Chr6 9884227 9889147 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Prci6g1352 MBF1 3.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1352 K03627 - rvl:131331516 240.736