Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1303 ATGGCAAGTGACTGCAGTGGGAAGGAGATTGCCTATACCATTACCGTTGGTCAGTCAAATGGTCAATTCAAAACAGTTCAAGCAGCAATTGATTCCATAAACACCAACAATGATCGCTGGGTTAAAATCCACATATACCCAGGCAAATACATAGAGAAGGTCGAGGTTCCTTATGAAAAACCATGTATCTTCTTAGAAGGGGAAGGCAGAGCCGTTACAACAATTACGTACAATGGCCACCAGCAAACAGATTCCAGCGCCACGTTCTCCTCTGTTCCCAACAGTGTTGTTGTCGCCGGCATCAACTTCGAGAACTCGTGGGATCTATCAACAGCATCATACATTAGAGGAAGCCGAATCATACAACCAGCACTAGCAGCAAGAATATATGGAGACAAATCTGCTTTTATCGATTGTGGCTTCTTGGGTTTTCAAGATACACTCTGGGATGTACAGGGTCGTCATTACTTTAAGAATTGTTATATCGAGGGTGCAGTGGACTTCATTTTCGGCAACGGCCAGTCCTATTACGAGAATTGTTATGTGAATGCGTCATTAAGCACGTCAAAGGCTCAAGTGGCTTTGGGTTATATAACAGCGCAAGGGAGAGAATCAAAAGAGGAGACAAGTGGATTTGTATTCAAGGGAGGTAGGGTTGTTGGAAGTGGTCCAGTTATGTTGGGAAGAGCCTATGGTCCATACTCCAGAGTCATATTTCATGAAACATATTTGGATTCAGTGGTTGATCCTCTAGGATGGGATGCTTGGAGTCATGCAGGACAAGAGACCAGGGGCGAGTTTAAATAG 807 0.4411 MASDCSGKEIAYTITVGQSNGQFKTVQAAIDSINTNNDRWVKIHIYPGKYIEKVEVPYEKPCIFLEGEGRAVTTITYNGHQQTDSSATFSSVPNSVVVAGINFENSWDLSTASYIRGSRIIQPALAARIYGDKSAFIDCGFLGFQDTLWDVQGRHYFKNCYIEGAVDFIFGNGQSYYENCYVNASLSTSKAQVALGYITAQGRESKEETSGFVFKGGRVVGSGPVMLGRAYGPYSRVIFHETYLDSVVDPLGWDAWSHAGQETRGEFK 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1303 268 Pfam Pectinesterase 18 258 IPR000070 GO:0030599|GO:0042545
Prci6g1303 268 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 11 263 - -
Prci6g1303 268 ProSitePatterns Pectinesterase signature 2. 162 171 IPR033131 -
Prci6g1303 268 Gene3D - 7 268 IPR012334 -
Prci6g1303 268 SUPERFAMILY Pectin lyase-like 10 259 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1303 Prci-Chr6 9538630 9540094 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1303 4 262 Carbohydrate Esterase AT2G19150 45.769 1.33e-75 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1303 - - cave:132169033 336.65