Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1302 ATGGTTAATTGTATGGTGCACAGTCTCGGTACGTGTTGCCCACCGAGGAGACTCTTGTTCTCACCATCTCTTTTCTCATTTACTTTACGGTACCGGTGTATCGTGTTCCCGGCGCCTGCAGTCTCTGGAACTTACAAGAAGGAGACCAAAGAGAAGGTCATTGTGATTTCTGGACCCACTGGCGCTGGTAAAAGTCGGCTTGCATTCGAACTTACGAAGCGACTCAATGGCGAAATTGTCAGTGCCGACTCGGTCCAGGTGTACCAAGGTCTTGATGTTGGATCCGCTAAACCTTCCCCAAATGATAGAAAGGAGGTAAAACATCATCTGATTGACATATTGCATCCATCTAAAGACTATTCAGCTGGAAATTTTTTTGAGGATGCAAGGCAAGCTACAAGATGTATCCTTGACAATGATCGTGTTCCCATAGTTGTTGGGGGAACTGGGCTGTACTTAAGATGGTTCATATATGGAAAACCAGATGTTCCCAAAGCCTCTCCTGATGTCAAATCTGAATTATATTCAGAGTTAGCTGAGCTGCAGAAAAATGAAGATTGGGATGCTGCTGTGCAGTTGGTGGTAAATGCAGGAGACCTGAAGGCCCAAACTTTAGCAGTGAATGATTGGTATCGATTACAGCGCAGCCTAGAGATTATCAAATCTAGTGGATCACCTCCATCAGCTTTTCGGGTGCCATATGATTCTTTCAGGGGACAGGGGGGTTATAGTGATACCAATGGTTTTGAATCTTCTGATGTCAACATTTCTGGTGATTCAATGGAAGATCCCATGTTCTCAGATTTGCCTTATGAGTTCATCTGCTTTTTCCTTTCTCGTCAGAGACTTGAACTATATAAAAGAATTGACCAGCGGTGTGAAGATATGCTATTAGGAAGGGATGGGATTCTTTCTGAGGCTCAATGGCTTCTAAAGTTGGGTCTTCATCCAAATTCCAATTCTGCAACACGAGCAATTGGTTATAGACAAGCTATGGAATACTTACTCAGATGCCAACAACATGGGGGACAGAGTTCAGCTGAAGAATTTTACAATTTTTTATCTGAATTTCAAAAAGAAACTAGGAATTTTGCAAAAAGACAATTGACGTGGTTTCGCAATGAGCAGATATACCACTGGCTTGATGCTTCCAAACCACTGAATGAAATTATTGAATTCATCAACAATGCTTATCGTGATTGGAGTGGAAATCGCATCGTGCCTGAATGCCTTGGAATGTCTAGAGATATACCTAATCGCCAAGAAGCTGCTCAACTCAAGTCATACCGCCCAAAAAATAGGCATTTCATTAAAGATGAAGATTGTTCACATATTCTGGAATGGATAAGGACTGAAGAATAA 1362 0.4207 MVNCMVHSLGTCCPPRRLLFSPSLFSFTLRYRCIVFPAPAVSGTYKKETKEKVIVISGPTGAGKSRLAFELTKRLNGEIVSADSVQVYQGLDVGSAKPSPNDRKEVKHHLIDILHPSKDYSAGNFFEDARQATRCILDNDRVPIVVGGTGLYLRWFIYGKPDVPKASPDVKSELYSELAELQKNEDWDAAVQLVVNAGDLKAQTLAVNDWYRLQRSLEIIKSSGSPPSAFRVPYDSFRGQGGYSDTNGFESSDVNISGDSMEDPMFSDLPYEFICFFLSRQRLELYKRIDQRCEDMLLGRDGILSEAQWLLKLGLHPNSNSATRAIGYRQAMEYLLRCQQHGGQSSAEEFYNFLSEFQKETRNFAKRQLTWFRNEQIYHWLDASKPLNEIIEFINNAYRDWSGNRIVPECLGMSRDIPNRQEAAQLKSYRPKNRHFIKDEDCSHILEWIRTEE 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1302 453 Pfam IPP transferase 86 375 - -
Prci6g1302 453 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 389 IPR027417 -
Prci6g1302 453 Gene3D - 162 232 - -
Prci6g1302 453 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 50 388 IPR039657 -
Prci6g1302 453 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 53 230 IPR018022 GO:0008033
Prci6g1302 453 Gene3D - 50 443 IPR027417 -
Prci6g1302 453 FunFam tRNA dimethylallyltransferase 9 161 232 - -
Prci6g1302 453 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 188 IPR027417 -
Prci6g1302 453 Hamap tRNA dimethylallyltransferase [miaA]. 53 392 IPR018022 GO:0008033
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1302 Prci-Chr6 9511304 9518023 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1302 56 230 C2H2 Transcription Factor Family AT2G27760 26.776 1.20e-16 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1302 K00791 - gmx:100808814 645.195