Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1282 ATGGCACAGTTACCCCCCAAGGTTCCGACCATGACCCAGAATTGGCCATCGTTTCCTCACCAAAAGTTACCCACAATGCCGCCGAGTTTTATTAATCCCACTCAACAGTTTCAGCAACAAGGCTCGCCGTCACCGCCGCCGTTGACATTACCGACTTGGGTGGACGAGTTCCTCGACTTCTCCTCAGCACGGCGGGGGGCTCACCGGCGGTCTGCGAGTGATTCCATTGCATACCTCGACACGGCATTCCTCGAGGAATGTCGGAAACCGGCTGGAGGAGCCGGAGCCCATCTTGGGTTTGACAGGCTTGATGACGACCAGCTTATGTCCATGTTCTCCGATGACATTGGCTCGGTTTCCTTGCCGCCGTCATTTGCCACTGCATCGAACCCATCCACGCCGTCCGATGACCAGAATAGCAATCACGAGGAGAAGCCTATGGTGCTTGATGACGTCGTCCCGACACAGGACCTTCAACTGCAGATACAGCCCAAGAATGAACCAGGGGAGGTGGAGAGCGCATGCAAGAATGACGGTGACACTCTTCCGCCCCGCCGCCGTCCGCTGCAGGCGGGCGCCGAATCCATCGTCGATCCAAAAAGAGTTAAAAGAATTTTGGCTAATCGGCAGTCAGCTCAGAGATCCAGGGTGAGAAAGCTGCAATACATTTCTGATTTAGAAAGAAGCGTGTCAACTTTGCAGACGGAGGTATCAGCATTGTCGCCGAGAGTTGCATTCTTGGACCACCAACGTTTGATTCTGAACGTAGACAATAGTACCTTAAAGCAACGTATTGCTGCTTTGGCTCAGGACAAGATTTTCAAAGATGCTCACCATGAAGCACTAAAGAAGGAAATAGAAAGACTAAGGCAAATCTATCACCAACAACAGAACCTGCACAAGATGGACAGGTCTGTGAACAATAATAATAACGGCCATCCGCTCCACTCTCCTCCACAACCACGGACATCGACGACGACGACGACATCATTGCCGGCAGCAGCACCACCACTAGCGGAGACACAACCAACACTAATGCCACCGCGGTCTCAGCCCGTAGGATGTTTGGACAAGGAACAGCTTATGAGTTGA 1092 0.5238 MAQLPPKVPTMTQNWPSFPHQKLPTMPPSFINPTQQFQQQGSPSPPPLTLPTWVDEFLDFSSARRGAHRRSASDSIAYLDTAFLEECRKPAGGAGAHLGFDRLDDDQLMSMFSDDIGSVSLPPSFATASNPSTPSDDQNSNHEEKPMVLDDVVPTQDLQLQIQPKNEPGEVESACKNDGDTLPPRRRPLQAGAESIVDPKRVKRILANRQSAQRSRVRKLQYISDLERSVSTLQTEVSALSPRVAFLDHQRLILNVDNSTLKQRIAALAQDKIFKDAHHEALKKEIERLRQIYHQQQNLHKMDRSVNNNNNGHPLHSPPQPRTSTTTTTSLPAAAPPLAETQPTLMPPRSQPVGCLDKEQLMS 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1282 363 PANTHER BASIC LEUCINE ZIPPER 34 1 323 - -
Prci6g1282 363 MobiDBLite consensus disorder prediction 1 20 - -
Prci6g1282 363 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 203 218 IPR004827 GO:0003700|GO:0006355
Prci6g1282 363 SMART brlzneu 196 260 IPR004827 GO:0003700|GO:0006355
Prci6g1282 363 MobiDBLite consensus disorder prediction 166 187 - -
Prci6g1282 363 FunFam Basic leucine zipper 61 199 272 - -
Prci6g1282 363 MobiDBLite consensus disorder prediction 122 143 - -
Prci6g1282 363 Coils Coil 279 299 - -
Prci6g1282 363 MobiDBLite consensus disorder prediction 303 363 - -
Prci6g1282 363 MobiDBLite consensus disorder prediction 1 46 - -
Prci6g1282 363 MobiDBLite consensus disorder prediction 27 43 - -
Prci6g1282 363 MobiDBLite consensus disorder prediction 122 137 - -
Prci6g1282 363 CDD bZIP_plant_RF2 201 251 IPR044759 GO:0003700|GO:0006355
Prci6g1282 363 MobiDBLite consensus disorder prediction 303 335 - -
Prci6g1282 363 SUPERFAMILY Leucine zipper domain 200 254 IPR046347 GO:0003700|GO:0006355
Prci6g1282 363 Gene3D - 199 271 - -
Prci6g1282 363 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 198 250 IPR004827 GO:0003700|GO:0006355
Prci6g1282 363 Pfam bZIP transcription factor 200 244 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1282 Prci-Chr6 9317916 9320704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1282 1 278 bZIP Transcription Factor Family AT3G58120 51.987 1.42e-81 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci6g1282 bZIP_1 1.6e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1282 - - pcin:129314259 695.271