Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1278 ATGCCTTATATGCAAGCACCTAATGTTAACGGAAGTTCATTAGAGAATGCAAATATGGGTTTGCAGAGATATCACGATACAGCTAGTAACATAAATGGCCTAAGGTTTGTTCTTCCTCCTGTCAACCACCACCATAATTATCATCATCCAGCAGTGCCAATGAGAGGATTCAGGGGCCACAATATCATTTTTCAACCTCCAGTAACTGCAGCTTCTTATAGAATTCCAACAAATCCTTTATGCAATGCTTTGATCCCTACACAGAATGGTTTTGAGATGGGTCCTAGGCATGTTAGCCTTGTGCCATCAGCAGGCCTCCAGGTTCGTCCTCATAGAGGATACATGAATGAGACAACAATTGGGCATCGAAATCTTCACCCTATGGGCTATCTCCAAGTTGATGTAGATGTTGCCATACTGGATGAAGTGGGATTGGTTGACCATCACAGAGACATGCGCTTGGACATAGAGGATATGTCTTATGAGGAGCTTCTTGCATTGGGCGAGCGAATTGGCAATGTAAGCACTGGTTTATCAGAACAATCTATTTCAGCTTTAATGAAAACTAGAATTTATGCAACCTCCACTGCTATTAACCCGGAAGAGGAAGAAACTTCAGAGGATCAGGAAACTGATTCATGCATAATATGCCAGGATAAATATGAGAACAGACAGAAGGTAGGAATTCTTCAATGCGGTCATGAGTATCATGCAGATTGCTTGAAGAAATGGCTTCTTGTGAAAAATGTCTGCCCCATATGCAAATCAGAAGCATTGACTCCTGGAAAGGACAAAGGAGTATAG 804 0.4192 MPYMQAPNVNGSSLENANMGLQRYHDTASNINGLRFVLPPVNHHHNYHHPAVPMRGFRGHNIIFQPPVTAASYRIPTNPLCNALIPTQNGFEMGPRHVSLVPSAGLQVRPHRGYMNETTIGHRNLHPMGYLQVDVDVAILDEVGLVDHHRDMRLDIEDMSYEELLALGERIGNVSTGLSEQSISALMKTRIYATSTAINPEEEETSEDQETDSCIICQDKYENRQKVGILQCGHEYHADCLKKWLLVKNVCPICKSEALTPGKDKGV 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1278 267 SMART ring_2 214 254 IPR001841 -
Prci6g1278 267 ProSiteProfiles Zinc finger RING-type profile. 214 255 IPR001841 -
Prci6g1278 267 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 21 259 IPR045191 GO:0061630
Prci6g1278 267 SUPERFAMILY RING/U-box 213 259 - -
Prci6g1278 267 Pfam Ring finger domain 212 255 IPR001841 -
Prci6g1278 267 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 170 259 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1278 Prci-Chr6 9286502 9291015 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1278 147 259 C3H Transcription Factor Family AT2G15530 53.097 3.07e-36 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1278 K19041 - gmx:100800642 327.02