Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1272 ATGCCTTATATGCAAGCACCTAATGTTAACGGAAGTTCATTAGAGAATGCAAATATGGGTTTGCAGAGATATCACGATACAGCTAGTAACATAAATGGCCTAAGGTTTGTTCTTCCTCCTGTCAACCACCACCATAATTATCATCATCCAGCAGTGCCAATGAGAGGATTCAGGGGCCACAATATCATTTTTCAACCTCCAGTAACTGCAGCTTCTTATAGAATTCCAACAAATCCTTTATGCAATGCTTTGATCCCTACACAGAATGGTTTTGAGATGGGTCCTAGGCATGTTAGCCTTGTGCCATCAGCAGGCCTCCAGGTTCGTCCTCATAGAGGATACATGAATGAGACAACAATTGGGCATCGAAATCTTCACCCTATGGGCTATCTCCAAGTTGATGATGTTGCCATACTGGATGAAGTGGGATTGGTTGACCATCACAGAGACATGCGCTTGGACATAGAGGATATGTCTTATGAGGAGCTTCTTGCATTGGGCGAGCGAATTGGCAATGTAAGCACTGGTTTATCAGAACAATCTATTTCAGCTTTAATGAAAACTAGAATTTATGCAACCTCCACTGCTATTAACCCGGAAGAGGAAGAAACTTCAGAGGATCAGGAAACTGATTCATGCATAATATGCCAGGATAAATATGAGAACAGACAGAAGGTAGGAATTCTTCAATGCGGTCATGAGTATCATGCAGATTGCTTGAAGAAATGGCTTCTTGTGAAAAATGTCTGCCCCATATGCAAATCAGAAGCATTGACTCCTGGAAAGGACAAAGGAGTATAG 801 0.4195 MPYMQAPNVNGSSLENANMGLQRYHDTASNINGLRFVLPPVNHHHNYHHPAVPMRGFRGHNIIFQPPVTAASYRIPTNPLCNALIPTQNGFEMGPRHVSLVPSAGLQVRPHRGYMNETTIGHRNLHPMGYLQVDDVAILDEVGLVDHHRDMRLDIEDMSYEELLALGERIGNVSTGLSEQSISALMKTRIYATSTAINPEEEETSEDQETDSCIICQDKYENRQKVGILQCGHEYHADCLKKWLLVKNVCPICKSEALTPGKDKGV 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1272 266 SUPERFAMILY RING/U-box 212 258 - -
Prci6g1272 266 ProSiteProfiles Zinc finger RING-type profile. 213 254 IPR001841 -
Prci6g1272 266 Pfam Ring finger domain 211 254 IPR001841 -
Prci6g1272 266 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 169 258 IPR013083 -
Prci6g1272 266 SMART ring_2 213 253 IPR001841 -
Prci6g1272 266 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 21 258 IPR045191 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1272 Prci-Chr6 9286043 9291015 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1272 131 258 C3H Transcription Factor Family AT2G15530 48.507 2.56e-37 137