Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1267 ATGGGTAGGCCACCCAGTAACGGAAGCCCTGCCTTCCGCTTTACTCAGGCTGAGGTTGCAGAAATGGAGGCAATTTTGCAAGAGCATAATAATGCTATGCCAGCACGTGATGTTCTTACTGCTCTTGCAGAGAAGTTCAGTGAATCTCCTGAACGTAAAGGGAAGATTACTGTGCAGATGAAGCAAGTTTGGAACTGGTTTCAAAATAAACGGTACGCTATAAGGGCGAAATCTAGTAAGGCTCCTGGAAAGTTAAGTATTACTCCGATGGCTCGAGATGATTCAACTCCAGTTAGAAATATGCCTCAACCAATGGCTACTCCTATGCCTCCTGCTTCAGTTTCAACAGGAAAAGGTGCTCCAGAAAACTCAGCAATGGAGTTTGAAGCTAAGTCTGGAAGGGATGGAGCATGGTACGATGTTGCCAACTTTCTATCTCACAGGCATTTGGAAACCAGTGATCCGGAAGTTCTGGTCCGATTTGCTGGTTTTGGACCTGAGGAAGATGAATGGGTTAATGTCCGAAAAAACATCCGGCCTCGCTCTCTGCCATGTGAATCATCAGAATGTGTAGCAGTGCTCCCTGGGGATCTCATACTGTGTTTTCAGGAAGGTAAGGAGCAGGCTCTTTACTTTGATGCTCATGTCCTGGATGCTCAAAGGCGGAGGCATGATGTTAGAGGCTGTCGTTGTAGATTTCTGGTTCGTTACGATCATGATCAATCAGAGGAAATTGTTCCACTTAGGAAGGTTTGTCGTAGGCCTGAGACCGATTACAGGTTACAACAACTTCATGCTATGAATGAGGCAACACCGGCGGACCAGCAAAAGACCGGCATGGACTTTACGCCTGTTCATGCTGTCAGGGTTACAAGCTCAGCTGAAACAGTGCAAAAACAGCCGAGTGCAAACATCGCCATGGCCCCACAAGTTTTGCAAGCTACTGTTACTTTAGCCCCACAACCTATGAATGTAGATCAGAGAAAAGCTGAAGTTTCCAATGATATGACTGGAGGAAACACCGTCATACGCCCTGGCGGTGCTGCATTTACCACCAGTGTCGTTACTAGTGGTGTTCCCCCAAGTGGAACCACATTTACCAGCAATGTTGTTGCTAGCAGTGTGCCCCCTGGTGTTACTGCATTTCCCAGCAATGTCGTTTCAAGCAGTGCTCCGGTGGTTTCGAGTCAGAATCTGGCTGAAGGAAAATGA 1212 0.4719 MGRPPSNGSPAFRFTQAEVAEMEAILQEHNNAMPARDVLTALAEKFSESPERKGKITVQMKQVWNWFQNKRYAIRAKSSKAPGKLSITPMARDDSTPVRNMPQPMATPMPPASVSTGKGAPENSAMEFEAKSGRDGAWYDVANFLSHRHLETSDPEVLVRFAGFGPEEDEWVNVRKNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQSEEIVPLRKVCRRPETDYRLQQLHAMNEATPADQQKTGMDFTPVHAVRVTSSAETVQKQPSANIAMAPQVLQATVTLAPQPMNVDQRKAEVSNDMTGGNTVIRPGGAAFTTSVVTSGVPPSGTTFTSNVVASSVPPGVTAFPSNVVSSSAPVVSSQNLAEGK 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1267 403 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 333 IPR039276 -
Prci6g1267 403 SMART HOX_1 7 81 IPR001356 GO:0003677
Prci6g1267 403 SUPERFAMILY Homeodomain-like 4 77 IPR009057 -
Prci6g1267 403 Gene3D - 185 257 - -
Prci6g1267 403 Gene3D - 123 184 - -
Prci6g1267 403 CDD homeodomain 13 75 IPR001356 GO:0003677
Prci6g1267 403 Gene3D - 9 84 - -
Prci6g1267 403 ProSiteProfiles 'Homeobox' domain profile. 5 77 IPR001356 GO:0003677
Prci6g1267 403 Pfam SAWADEE domain 125 252 IPR032001 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1267 Prci-Chr6 9254619 9262829 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Prci6g1267 SAWADEE 4e-40 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1267 - - qsa:O6P43_001009 555.058