Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1255 ATGGCTCCTAGAGAAAGACTTGCTGACCCCAACCCGACCCACACTGCCAAAGAGATCCGGTACAGAGGCGTGCGAAAGAGGCCATGGGGGCGCTACGCCGCTGAGATTCGTGATCCCGGCAAGAAAACCCGCGTTTGGTTGGGCACTTTTGATACGGCTGAGGAGGCGGCCCGTGCTTACGACGCGGCAGCAAGGGAGTTCCGTGGCGCCAAGGCCAAGACTAATTTTCCGGCTCCGTCTGAGCTTCCGAACAACTTCAGCCATAGCCCTAGCCAGAGCAGCACGCTTGAGTCTTCCTCGCCACCGCCAGTCGCTCCTCCGCCGCTAGAACTTTCCCTCGGGACACTTACTTCCGGCGGCGCGTTGGGGTTCCCGATCATTCCAGTGGCTCGTCCCGTCATGTTTTTTGACGCGTTTGCTCGGGCGGACAACATGGTGGCAGCTACTGGCCGACGGGAGATTTGCGGGTTCGATTGTCCAGTGGCCGAGTTCCCCCGCTCCGTCTGCGATGGCGGTGCCCACAGTGACTCCGATTCGTCTTCCGTCGTTGATTATGAGCGCGCTTCGCCACGAACAGTCCTAGATCTCGACCTTAACGTTCCTCCTCCGGCGGAGGTTGCCTGA 624 0.6026 MAPRERLADPNPTHTAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDAAAREFRGAKAKTNFPAPSELPNNFSHSPSQSSTLESSSPPPVAPPPLELSLGTLTSGGALGFPIIPVARPVMFFDAFARADNMVAATGRREICGFDCPVAEFPRSVCDGGAHSDSDSSSVVDYERASPRTVLDLDLNVPPPAEVA 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1255 207 CDD AP2 20 78 IPR001471 GO:0003700|GO:0006355
Prci6g1255 207 FunFam Ethylene-responsive transcription factor 2 20 78 - -
Prci6g1255 207 SUPERFAMILY DNA-binding domain 20 78 IPR016177 GO:0003677
Prci6g1255 207 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 15 150 - -
Prci6g1255 207 Pfam AP2 domain 20 69 IPR001471 GO:0003700|GO:0006355
Prci6g1255 207 MobiDBLite consensus disorder prediction 1 22 - -
Prci6g1255 207 Gene3D AP2/ERF domain 19 78 IPR036955 GO:0003700|GO:0006355
Prci6g1255 207 MobiDBLite consensus disorder prediction 74 111 - -
Prci6g1255 207 MobiDBLite consensus disorder prediction 78 99 - -
Prci6g1255 207 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Prci6g1255 207 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Prci6g1255 207 ProSiteProfiles AP2/ERF domain profile. 20 77 IPR001471 GO:0003700|GO:0006355
Prci6g1255 207 SMART rav1_2 20 83 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1255 Prci-Chr6 9126271 9127296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1255 8 137 AP2-EREBP Transcription Factor Family AT3G15210 65.517 6.49e-52 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci6g1255 AP2 1.9e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1255 K09286 - zju:107432572 199.904