Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1248 ATGGCTGATGCAGCGGGTCTAGCTGAGGCAGCAGGGTCAAGATTTACTTCCTTGGAGCTTATTGGACAAGGTTCATTTGGTGATGTCTATAAAGCGTTTGACAAGGAGCTCAACAAACAGGTTGCTATCAAAGTGATTGATTTGGATGAATCGGAGGATGAGATTGATGACATTCAAACGGAAATTGCTGTTCTTTCACAATGTCGTTGTCCATACATTACTGAGTATTATGGCTCCTATCTTCATGAAACTAAACTTTTCATCATAATGGAGTACATGGCCGGAGGTTCTGTAGCTGACCTACTTCAATCAGGCCATCCCCTTGATGAAGTGTCAATCGGTTGCATTTTGCGGGACTTGTTGCATGCTGTTGATTATTTGCATACTGAAGGAAAAATTCATAGAGACATCAAAGCAGCAAACATTTTATTGTCTGAGAATGGTGACGTAAAGGTTGCAGATTTTGGTGTTTCTGCGCAGCTAACTAGGACCATATCAAGGAGAAAGACATTTGTAGGAACACCATTCTGGATGGCACCAGAGGTTATTCAGACTGCAGAAGGATATAATGAGAAGGCAGATATCTGGTCTCTGGGGATCACAACAATTGAGATGGCAAAAGGGGAGCCTCCACTTAGTGACCTTCACCCAATGAGAGTGCTTTTCATCATACCCCGTGAGAACCCACCACAGCTAGATGATCATTTTTCTCGTCCCATTAAAGAATTTGTTTCACTGTGTTTAAAAAAGCTCCCAGCTGAGAGGCCAAGTGCTAAGGAACTTCTCAAACATCGTTTTATACGTACTGCTAGGAAGAGTCCAAAGCTTTTGGAAAGAATAAGGGAGCGTCCCAAGCATCAAACAAAAGAAGGGGGCACACCTAGAAATGGTCCAATAGGGGAGCCATCTGATACAATGAAAGTAGCAAGAGATTTAAGAGAAGAAGCTACTCAATACATTCCCAGTGGTCAGGATAAAACCCTGAAAAATTCTGGATGGGACTTCAGCATTAGTGGATCAGAGGGTACTGGAACTTTTCGCAGTGTTGTGCGACCACCTCAGTATAGAGATAAGAAAACAGATTTTTCGCAAAATCAACTTGACCAAAAGAAGGCACCAGAGAGTGGCTATCATGGGGCATCTTCCTATAGAAGCACTCTTAATGAATCATCAGAAACTTCCCTTGAAGATGATCAATTGTCTGGGAATGGATCAGGAACTGTTGTTATTCGATCTCCAAAAGGATCACAATCATCACGCCTTCATGACCAAAGCTCGCTGTCTGGCAGTAGCTATGCTTCTTTTGAAGATACTTCTTGCAGTGGAACTGTTGTTGTCCGTGGTCAGCATGATGATTATGACCCTCCACAGACACTGAGGTCCAGACTGGGACTTAATGAGAGAACTGCAAATGCCTCACTTGAAGATAGTGCCTCAAATCTTGCAGAGGCAAAGGCCGCTATCCTAACACCAAGGAAAGGAAATACTCGAGAGAAAGTTGCACAGGAAAAGACGGGCAATGATGTGCAGGAAAGCAGAAGAGACCAAGTGACAAGCAGCTCTGATTTCTCAAGATCATCTCGTGTATACAATGGTCCACAACAGGGAATTTCAAGGCTGCACCATGCTGTTGATAATCAAGACAATATCAGAATATTGTCATCCTCTATGGCATTATCTGTTTTACTTATTCCTTCTTTAAAAGAGGCCTTTGCTGATGATCCAGAAGGGTCTTTAATACAAGAAATAATCAATTCACTCTTGCACATGGAACACGTGAAGTCTGGATCATGTGATACTCTTGTCAAAAAGTTGCTTCAGCGATTAGCAAGTTCAAAGGAATCTTCGGTGAAGGATCTGCAGGAGCTAGCAGCTCAATTATTCACCAAGACCAAGTCAGCTTCTGAAGAATCCCAAAATGCAATTGCAGATGTTGATGGCAGGAGGAAACAACAGAACAGGGAACTTCATTCAAATAGCAATCTAGGCCCTCTTGCAAGATTTCTTATCTCAAGATGGCAAGGTCAAGCCTGA 2034 0.4267 MADAAGLAEAAGSRFTSLELIGQGSFGDVYKAFDKELNKQVAIKVIDLDESEDEIDDIQTEIAVLSQCRCPYITEYYGSYLHETKLFIIMEYMAGGSVADLLQSGHPLDEVSIGCILRDLLHAVDYLHTEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQTAEGYNEKADIWSLGITTIEMAKGEPPLSDLHPMRVLFIIPRENPPQLDDHFSRPIKEFVSLCLKKLPAERPSAKELLKHRFIRTARKSPKLLERIRERPKHQTKEGGTPRNGPIGEPSDTMKVARDLREEATQYIPSGQDKTLKNSGWDFSISGSEGTGTFRSVVRPPQYRDKKTDFSQNQLDQKKAPESGYHGASSYRSTLNESSETSLEDDQLSGNGSGTVVIRSPKGSQSSRLHDQSSLSGSSYASFEDTSCSGTVVVRGQHDDYDPPQTLRSRLGLNERTANASLEDSASNLAEAKAAILTPRKGNTREKVAQEKTGNDVQESRRDQVTSSSDFSRSSRVYNGPQQGISRLHHAVDNQDNIRILSSSMALSVLLIPSLKEAFADDPEGSLIQEIINSLLHMEHVKSGSCDTLVKKLLQRLASSKESSVKDLQELAAQLFTKTKSASEESQNAIADVDGRRKQQNRELHSNSNLGPLARFLISRWQGQA 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1248 677 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1248 677 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Prci6g1248 677 Coils Coil 48 68 - -
Prci6g1248 677 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 10 630 - -
Prci6g1248 677 MobiDBLite consensus disorder prediction 496 511 - -
Prci6g1248 677 MobiDBLite consensus disorder prediction 273 290 - -
Prci6g1248 677 MobiDBLite consensus disorder prediction 486 534 - -
Prci6g1248 677 Gene3D Transferase(Phosphotransferase) domain 1 12 296 - -
Prci6g1248 677 MobiDBLite consensus disorder prediction 638 658 - -
Prci6g1248 677 SUPERFAMILY Protein kinase-like (PK-like) 12 310 IPR011009 -
Prci6g1248 677 MobiDBLite consensus disorder prediction 379 434 - -
Prci6g1248 677 MobiDBLite consensus disorder prediction 342 434 - -
Prci6g1248 677 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1248 677 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1248 677 CDD STKc_MST3_like 13 287 - -
Prci6g1248 677 MobiDBLite consensus disorder prediction 512 534 - -
Prci6g1248 677 MobiDBLite consensus disorder prediction 273 304 - -
Prci6g1248 677 FunFam serine/threonine-protein kinase dst1 isoform X1 12 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1248 Prci-Chr6 9086233 9095056 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1248 1 677 MAP Kinase Kinase Kinase Kinase AT3G15220 61.626 0.0 803
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Prci6g1248 Pkinase 1.1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1248 K08838 - gmx:100815042 954.51