Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1246 ATGGCTGATGCAGCGGGTCTAGCTGAGGCAGCAGGGTCAAGATTTACTTCCTTGGAGCTTATTGGACAAGGTTCATTTGGTGATGTCTATAAAGCGTTTGACAAGGAGCTCAACAAACAGGTTGCTATCAAAGTGATTGATTTGGATGAATCGGAGGATGAGATTGATGACATTCAAACGGAAATTGCTGTTCTTTCACAATGTCGTTGTCCATACATTACTGAGTATTATGGCTCCTATCTTCATGAAACTAAACTTTTCATCATAATGGAGTACATGGCCGGAGGTTCTGTAGCTGACCTACTTCAATCAGGCCATCCCCTTGATGAAGTGTCAATCGGTTGCATTTTGCGGGACTTGTTGCATGCTGTTGATTATTTGCATACTGAAGGAAAAATTCATAGAGACATCAAAGCAAACATTTTATTGTCTGAGAATGGTGACGTAAAGGTTGCAGATTTTGGTGTTTCTGCGCAGCTAACTAGGACCATATCAAGGAGAAAGACATTTGTAGGAACACCATTCTGGATGGCACCAGAGGTTATTCAGACTGCAGAAGGATATAATGAGAAGGCAGATATCTGGTCTCTGGGGATCACAACAATTGAGATGGCAAAAGGGGAGCCTCCACTTAGTGACCTTCACCCAATGAGAGTGCTTTTCATCATACCCCGTGAGAACCCACCACAGCTAGATGATCATTTTTCTCGTCCCATTAAAGAATTTGTTTCACTGTGTTTAAAAAAGCTCCCAGCTGAGAGGCCAAGTGCTAAGGAACTTCTCAAACATCGTTTTATACGTACTGCTAGGAAGAGTCCAAAGCTTTTGGAAAGAATAAGGGAGCGTCCCAAGCATCAAACAAAAGAAGGGGGCACACCTAGAAATGGTCCAATAGGGGAGCCATCTGATACAATGAAAGTAGCAAGAGATTTAAGAGAAGAAGCTACTCAATACATTCCCAGTGGTCAGGATAAAACCCTGAAAAATTCTGGATGGGACTTCAGCATTAGTGGATCAGAGGGTACTGGAACTTTTCGCAGTGTTGTGCGACCACCTCAGTATAGAGATAAGAAAACAGATTTTTCGCAAAATCAACTTGACCAAAAGAAGGCACCAGAGAGTGGCTATCATGGGGCATCTTCCTATAGAAGCACTCTTAATGAATCATCAGAAACTTCCCTTGAAGATGATCAATTGTCTGGGAATGGATCAGGAACTGTTGTTATTCGATCTCCAAAAGGATCACAATCATCACGCCTTCATGACCAAAGCTCGCTGTCTGGCAGTAGCTATGCTTCTTTTGAAGATACTTCTTGCAGTGGAACTGTTGTTGTCCGTGGTCAGCATGATGATTATGACCCTCCACAGACACTGAGGTCCAGACTGGGACTTAATGAGAGAACTGCAAATGCCTCACTTGAAGATAGTGCCTCAAATCTTGCAGAGGCAAAGGCCGCTATCCTAACACCAAGGAAAGGAAATACTCGAGAGAAAGTTGCACAGGAAAAGACGGGCAATGATGTGCAGGAAAGCAGAAGAGACCAAGTGACAAGCAGCTCTGATTTCTCAAGATCATCTCGTGTATACAATGGTCCACAACAGGGAATTTCAAGGCTGCACCATGCTGTTGATAATCAAGACAATATCAGAATATTGTCATCCTCTATGGCATTATCTGTTTTACTTATTCCTTCTTTAAAAGAGGCCTTTGCTGATGATCCAGAAGGGTCTTTAATACAAGAAATAATCAATTCACTCTTGCACATGGAACACGTGAAGTCTGGATCATGTGATACTCTTGTCAAAAAGTTGCTTCAGCGATTAGCAAGTTCAAAGGAATCTTCGGTGAAGGATCTGCAGGAGCTAGCAGCTCAATTATTCACCAAGACCAAGTCAGCTTCTGAAGAATCCCAAAATGCAATTGCAGATGTTGATGGCAGGAGGAAACAACAGAACAGGGAACTTCATTCAAATAGCAATCTAGGCCCTCTTGCAAGATTTCTTATCTCAAGATGGCAAGGTCAAGCCTGA 2031 0.4264 MADAAGLAEAAGSRFTSLELIGQGSFGDVYKAFDKELNKQVAIKVIDLDESEDEIDDIQTEIAVLSQCRCPYITEYYGSYLHETKLFIIMEYMAGGSVADLLQSGHPLDEVSIGCILRDLLHAVDYLHTEGKIHRDIKANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQTAEGYNEKADIWSLGITTIEMAKGEPPLSDLHPMRVLFIIPRENPPQLDDHFSRPIKEFVSLCLKKLPAERPSAKELLKHRFIRTARKSPKLLERIRERPKHQTKEGGTPRNGPIGEPSDTMKVARDLREEATQYIPSGQDKTLKNSGWDFSISGSEGTGTFRSVVRPPQYRDKKTDFSQNQLDQKKAPESGYHGASSYRSTLNESSETSLEDDQLSGNGSGTVVIRSPKGSQSSRLHDQSSLSGSSYASFEDTSCSGTVVVRGQHDDYDPPQTLRSRLGLNERTANASLEDSASNLAEAKAAILTPRKGNTREKVAQEKTGNDVQESRRDQVTSSSDFSRSSRVYNGPQQGISRLHHAVDNQDNIRILSSSMALSVLLIPSLKEAFADDPEGSLIQEIINSLLHMEHVKSGSCDTLVKKLLQRLASSKESSVKDLQELAAQLFTKTKSASEESQNAIADVDGRRKQQNRELHSNSNLGPLARFLISRWQGQA 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1246 676 SUPERFAMILY Protein kinase-like (PK-like) 12 309 IPR011009 -
Prci6g1246 676 MobiDBLite consensus disorder prediction 378 433 - -
Prci6g1246 676 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Prci6g1246 676 MobiDBLite consensus disorder prediction 637 657 - -
Prci6g1246 676 Coils Coil 48 68 - -
Prci6g1246 676 CDD STKc_MST3_like 13 286 - -
Prci6g1246 676 Gene3D Transferase(Phosphotransferase) domain 1 12 295 - -
Prci6g1246 676 MobiDBLite consensus disorder prediction 272 303 - -
Prci6g1246 676 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 10 629 - -
Prci6g1246 676 MobiDBLite consensus disorder prediction 341 433 - -
Prci6g1246 676 ProSiteProfiles Protein kinase domain profile. 15 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1246 676 Pfam Protein kinase domain 16 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1246 676 MobiDBLite consensus disorder prediction 511 533 - -
Prci6g1246 676 FunFam serine/threonine-protein kinase dst1 isoform X1 12 298 - -
Prci6g1246 676 MobiDBLite consensus disorder prediction 272 289 - -
Prci6g1246 676 MobiDBLite consensus disorder prediction 495 510 - -
Prci6g1246 676 MobiDBLite consensus disorder prediction 485 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1246 Prci-Chr6 9085962 9095056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1246 1 676 MAP Kinase Kinase Kinase Kinase AT3G15220 61.484 0.0 797
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Prci6g1246 Pkinase 2.5e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1246 K08838 - gmx:100815042 948.347