Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1234 ATGGAGTTTCAGAGACCTCACTTTTCTGTTGTTCTCTGTTTCACTCTGTTCAGTCTTCTCTGTTATTGTTCTCAGGCGTATGTGTTCTATGCTGGTGGAAGAGATGGATGGGTTTTGAACCCTTCTGAGAATTACAATCACTGGGCAGAGAGAAACAGGTTTCAGGTCAATGACACTATTGTTTTCAAGTACAAGAAGGGGTCGAATTCGGTTTTGGTGGTGAACAAGGATGGTTACGACAAATGCAATAAGACTGATCCGGTCAAGAAATTTGATGATGGTGATTCAGTGTTCAAGTTTGATCGATCGGGACCGTTTTACTTTATTAGTGGGATGGATTATTATTGCGAAAAGGGTCAGAAATTGATCGTTGTGGTTTTGGCCATCAGATCGCCTCCTCCTCCCCCCTCTGTTTCCCAACCTCCGGTGGCCAATCAACCGTCTCCGGCGATTTCACCATATCCATCACCGAAGATATCTCCCTCACCGCCAGCTCCGGCTGTTTCACCATATCCAGCACCCAAGATATCTCCCACATCGCCAGCTCCTTCAATAACCCCTCCGGCTGTTTCCCCAGCACCGGCTAATGTGCCTTCCTACCCAACACCGGCGTCTGCTCCGGCTCCGGCAAAAACATCACCCACACCATCCCCTGCGAATCCACCAGCTTATTCTCCAACGTCACCGCCGTCTCCTGCGACATCGACCCCTGGATCGTCACCGCCCGCACCTCCGGCAACCACTCCATCATCTGTTCCAGGGTCATCGGAAACACCTTCGGCGAGCCCCCCAGGATCAGCGAACCCGTCGTCGTCGAATGAAACATCGCGGGCTCCACCAACTGGATCAGGTGCATGGGTGGTGGCTCCGTCAGGCTTACTGGTGTATTCTGCTGCCATTGTGCTGAGTGCTGCTCTCAGTGGAATTTTGGGTGGACAGGAAAAGAGATTATTATTATAA 960 0.5083 MEFQRPHFSVVLCFTLFSLLCYCSQAYVFYAGGRDGWVLNPSENYNHWAERNRFQVNDTIVFKYKKGSNSVLVVNKDGYDKCNKTDPVKKFDDGDSVFKFDRSGPFYFISGMDYYCEKGQKLIVVVLAIRSPPPPPSVSQPPVANQPSPAISPYPSPKISPSPPAPAVSPYPAPKISPTSPAPSITPPAVSPAPANVPSYPTPASAPAPAKTSPTPSPANPPAYSPTSPPSPATSTPGSSPPAPPATTPSSVPGSSETPSASPPGSANPSSSNETSRAPPTGSGAWVVAPSGLLVYSAAIVLSAALSGILGGQEKRLLL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1234 319 PRINTS Proline rich extensin signature 133 149 - -
Prci6g1234 319 PRINTS Proline rich extensin signature 161 173 - -
Prci6g1234 319 PRINTS Proline rich extensin signature 203 219 - -
Prci6g1234 319 PRINTS Proline rich extensin signature 176 197 - -
Prci6g1234 319 MobiDBLite consensus disorder prediction 134 249 - -
Prci6g1234 319 CDD OsENODL1_like 27 127 IPR041846 -
Prci6g1234 319 MobiDBLite consensus disorder prediction 134 287 - -
Prci6g1234 319 MobiDBLite consensus disorder prediction 250 280 - -
Prci6g1234 319 SUPERFAMILY Cupredoxins 26 127 IPR008972 -
Prci6g1234 319 ProSiteProfiles Phytocyanin domain profile. 27 128 IPR003245 GO:0009055
Prci6g1234 319 Gene3D - 25 130 IPR008972 -
Prci6g1234 319 Pfam Plastocyanin-like domain 37 120 IPR003245 GO:0009055
Prci6g1234 319 PANTHER BLUE COPPER PROTEIN 27 192 IPR039391 GO:0009055
Prci6g1234 319 FunFam Early nodulin-like protein 1 26 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1234 Prci-Chr6 8977279 8978735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1234 12 231 Phytocyanin Superfamily AT5G53870 43.191 8.92e-53 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1234 - - pcin:129314212 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g1234 6 8977279 8978735 Prci6g1234 6 8977279 8978735 ECH