Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1178 ATGGATCAAGAGATGGCAGACATTGAGACTCCAACAACTAACGGATCAGTTCCAGACATTTTACAGAAGAGGAATCGTTCTGTTACTCTCAAGTTCGAAGATGTTGTGTATAAAATCAAGACCAAGAGACAGGGATTATCATTTTCGTCGAAGAAGGTAAAAGAAGAAGAGAAAATAATCCTCAAGGGAGTAACAGGCATGATTGAACCTGGTGAAGTTCTAGCCATGCTTGGTCCATCTGGGAGTGGCAAAACGACTCTATTAACAGCCTTGGGAGGCAGGCTCGGAGGTGGGAAGCTTCAAGGGACTATAACCTACAATGGTGAAAAGTTCTCAAACTCAATGAAGAGAAACACAGGCTTTGTCACTCAAGATGATGTTCTCTACCCTCACTTGACTGTCACAGAAACCCTAGTTTTCACTGCACTTCTCAGACTTCCCAATACTTTCACCAAACAAGACAAGATCTTGCAGGCTGAAAGCGTGATAACACAATTAGGTTTAACCAGTTGTAAAGACAGCATAATAGGAGACACTTTATTGAGAGGGGTTTCTGGGGGTGAGAGGAAGAGGGTTAGCATTGGACAAGAAATGCTGGTAAACCCTAGCTTGCTGTTTTTAGATGAACCTACGTCCGGCCTCGATTCGACCAAAGCTCAGAGGATCGTGTCGTGTTTGTGGGAGCTAGCAAATAAGGGAAAAACTGTTGTCATGACCATACACCAACCTTCAAGTAGGCTGTATTACATGTTTCACAAGGTTGTGTTACTATCTGAAGGAAGCTCGGTGTACTTTGGCAAAGGATCTGAGGCCATGAAGTATTTTTCTAGCATTGGGTTTTCCCCGGCTGTTGCTATGAACCCTGCAGATTTCCTTTTAGATCTTGCAAATGGTGTCTACTCTGATGAATCAACAGAAGATCATGCTTTAGTCAAGTATAAATTGAAATCTGAATATACGAACAACATTGAGCCTCAATTGAAAGCAGTGCTTCACGAAACCGGTGGCTTTGATCGAAGCCAGCAAGACAGAGAATTTGGAAGATGGCCAACGTCATGGTGCCAGCAATTCTGTGTGTTGCTTAGGAGAGGAGTCAAAGAGAGGAGGCACCAATCCTTCTCTGGCCTAAGGATTTCTCAGATACTCATGGTTGCAATCATTTCAGGACTTTTATGGTACAAGTCTGATGTATCACACTTGCAGGATCAGGTAGGACTTCTATTCTTCGTTGTAGGCTTCTGGGGTTTCGTTCCTATGTTCCACGCCATCTTCACTTTCCCTCAAGAACGCATGATGCTTCAAAAAGAACGATCTTCAGGAACCTACAGACTCTCATCATACTTCATGTCAAGAATGGTCGGTGATCTTCCAATGGAACTTGTGCTTCCCACAATTTTCCTCATCATCACCTACTTGATGGCAGGCCTGAAACGCAAACTCTTAAGTTTCTTATACACTCTCCTTAGCCTCCTGTTCACAGTCCTAGTCGCACAAGGCCTAGGTCTAGCCCTAGGTGCTTTCCTCATGGATCAGAAAACAGCAACAACACTTGGTTCTGTGATGATGCTCAGCTTCATGCTGGCTGGTGGGTTCTACGTTCAAAATGTGCCCAAGTTTATAGCTTGGATCAAGTACGTGTCTATCAGCTATTACACTTTCAAGCTCTTTGTGGGGTCCCAGTATGGTAATAGGGACACGTACCCTTGTTCTGAAGGGCACTGTTTGGTGAAAGAGTTTCCTTCTATAAAGCAAATGGGGGTTGGTTTGAAAGGCCAGATTGTGGCTGCGTTGGCTTTAGGGATAATGCTGGTAGGTTATAGACTTTTGGCTTATTTTGCTCTTATGAGGATTGGGGTCACAAAAAAATTGGGTTAG 1875 0.4379 MDQEMADIETPTTNGSVPDILQKRNRSVTLKFEDVVYKIKTKRQGLSFSSKKVKEEEKIILKGVTGMIEPGEVLAMLGPSGSGKTTLLTALGGRLGGGKLQGTITYNGEKFSNSMKRNTGFVTQDDVLYPHLTVTETLVFTALLRLPNTFTKQDKILQAESVITQLGLTSCKDSIIGDTLLRGVSGGERKRVSIGQEMLVNPSLLFLDEPTSGLDSTKAQRIVSCLWELANKGKTVVMTIHQPSSRLYYMFHKVVLLSEGSSVYFGKGSEAMKYFSSIGFSPAVAMNPADFLLDLANGVYSDESTEDHALVKYKLKSEYTNNIEPQLKAVLHETGGFDRSQQDREFGRWPTSWCQQFCVLLRRGVKERRHQSFSGLRISQILMVAIISGLLWYKSDVSHLQDQVGLLFFVVGFWGFVPMFHAIFTFPQERMMLQKERSSGTYRLSSYFMSRMVGDLPMELVLPTIFLIITYLMAGLKRKLLSFLYTLLSLLFTVLVAQGLGLALGAFLMDQKTATTLGSVMMLSFMLAGGFYVQNVPKFIAWIKYVSISYYTFKLFVGSQYGNRDTYPCSEGHCLVKEFPSIKQMGVGLKGQIVAALALGIMLVGYRLLAYFALMRIGVTKKLG 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1178 624 SMART AAA_5 70 261 IPR003593 GO:0016887
Prci6g1178 624 Pfam ABC-2 type transporter 355 561 IPR013525 GO:0016020|GO:0140359
Prci6g1178 624 Pfam ABC-2 type transporter 241 308 IPR043926 GO:0140359
Prci6g1178 624 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 276 IPR027417 -
Prci6g1178 624 Gene3D - 43 278 IPR027417 -
Prci6g1178 624 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 30 284 IPR003439 GO:0005524
Prci6g1178 624 FunFam ABC transporter G family member 22 48 278 - -
Prci6g1178 624 ProSitePatterns ABC transporters family signature. 184 198 IPR017871 GO:0005524|GO:0016887
Prci6g1178 624 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 27 610 - -
Prci6g1178 624 Pfam ABC transporter 61 212 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1178 Prci-Chr6 8472072 8474917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1178 60 273 Calmodulin-binding Proteins AT2G36910 21.875 5.29e-08 54.3