Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1175 ATGGAGAGCACCGAATCGTCGACCGGTTCGCAGCAGCCAAACCTGCCCCCGGGTTTCCGGTTCCACCCGACCGATGAAGAGCTCGTTGTTCACTACCTCAAGAAGAAGGCGTCCTCTGCTCCTCTCCCCGTCGCGATCATCGCCGAGGTCGATCTCTACAAGTTCGATCCATGGGAACTCCCAGCTAAAGCAGCCTTTGGAGAGCAGGAATGGTACTTTTTTAGCCCGAGGGATAGGAAGTACCCAAACGGAGCTAGGCCAAACAGGGCCGCGACATCTGGGTATTGGAAGGCCACAGGAACTGATAAGCCTGTATTGACATCAAACGGAAACCAGAAGGTTGGGGTGAAGAAAGCTTTGGTTTTCTATGGAGGGAAGCCGCCGAGAGGGATCAAAACCAACTGGATCATGCATGAATACAGGCTTGCTGATAATAAGCCTAACAATAAGCCTCCGGGTTGTGACTTGGGCAACAAGAAGAACTCTCTCCGGCTAGATGATTGGGTGCTGTGCCGAATATACAAGAAGAGCAACGCACACAGGTCGCCTTTGGACCATGACGATTCATCGATGGATGATATGATTGGCGGGGTTCCTCCTTCGATCAACGTTGGACAGATGAACGCCAGATTCCATCTTTCGAAGATGTCCACAACAACCTACGGCGGATGTGGATCGTTATTGCTAGACACAAACGACGACCATAACTTACTGGAAGGGGTTGTCGCCACCACCACCAACAACAATGGAATCAACACAGATCTTCCTAATTTGATCCCTGCTATGGGTGCTGGAGCCTCCTCTTCAAACCTTTCTACTTCCATCACAAACCTACCTTCTAAACGAACACTGCCATCGCTGTACTGGAACGCCGATGAGGATCTGGCCGGAATCGCCTCAAAAAGATTGAGTTTGGACAATAATGAGAATGGTGGGTGCAGTGGCGGCGGCGGGGTTACTACTGTTGGTGCTAGTTCTATTGCCTCTCTGCTAAACCAGCTTCCACAGACTCCTCCAGTGGTAGGATCTATAGGAGATGGGCTATTTCGGGCACAGTATCAAATTCCTGGAATGCATTGGTATGCTTAA 1089 0.506 MESTESSTGSQQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVAIIAEVDLYKFDPWELPAKAAFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSNGNQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNKPPGCDLGNKKNSLRLDDWVLCRIYKKSNAHRSPLDHDDSSMDDMIGGVPPSINVGQMNARFHLSKMSTTTYGGCGSLLLDTNDDHNLLEGVVATTTNNNGINTDLPNLIPAMGAGASSSNLSTSITNLPSKRTLPSLYWNADEDLAGIASKRLSLDNNENGGCSGGGGVTTVGASSIASLLNQLPQTPPVVGSIGDGLFRAQYQIPGMHWYA 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1175 362 PANTHER NAC TRANSCRIPTION FACTOR 56 15 196 - -
Prci6g1175 362 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Prci6g1175 362 MobiDBLite consensus disorder prediction 1 20 - -
Prci6g1175 362 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
Prci6g1175 362 MobiDBLite consensus disorder prediction 1 17 - -
Prci6g1175 362 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Prci6g1175 362 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
Prci6g1175 362 FunFam NAC transcription factor 56 24 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1175 Prci-Chr6 8427373 8429635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1175 1 362 NAC Transcription Factor Family AT3G15510 55.000 2.25e-128 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci6g1175 NAM 6.9e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1175 - - gmx:100170710 506.908