Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1160 ATGGGCATGCTGGGAATTTTCATGTGGCCGTCATTTGCTTTGGCTTTTCTTCTAAGCATGGGTAACCAATCATCTTCCTCATTCATACCTGTTGATAACTACTTACTCGCTTGTGGCTCTTCTGTTAGCATAACCTTTCAGGGCAGGACTTTTTCCCCTGAATCTGTCTATGAAAATAATCATGCATTGGAATTGAAAAGCCAGAAATCTGTTGCTGTTACCTCTAATTCTGGTGCTCCATCTCCAATCTACCAATCAGCTAGAATCTTTTCGAGCAACGCTTCATATATATTCAGAATTAGACATGAAGGTAGGCACTGGATCCGCCTTTACTTCTACCCTATGCCCACCTTTCACCAGAATATGTCCTCTGCCTCAATAACAGTAATCACCGATAGTCTTGTGCTTCTCGATAACTTCACTTTTATGGAGTATGGTGGTCCCTACTTGTTCAAAGAGTATGCAATCAAAATTACATCTTCCACCTTGTCTCTCACATTCATCACTTCTAAAAACTCCTTCGTGTTTGTTAACGCAATTGAAGTTGTCTCTGTACCGGATGATCTCTTTGCTAATGCAATCAATATCACATCAGTTTCTTTGGAGGATTTTTCAGAAGCGACCCTTGAAACTATTTACCGGTTGGATATGGGTAATGAATATCTCAACACTCGGAACGATGACAGTGGCAGGAACTGGGAAGGTGATGAAAAATACCTCTCCTCTAAAAGTGTTGCTCTGAATACTTCAGTTGATAATTCATCTGTATATAATAATTCCAAAGTTGTAACTGACAAAGCACCAGCATGGGTCTATGCTACAGCCAAAGCCATGGCGGACGTATCAAGATCCAAATTAAGCTGGGTCTTCTCTGTAAATCCAAACTGCAGGTATTTTGTTCGGGGGCATTTCTGTGATATCATAAGCAACCCACCAGATGTTACAATTTTCAATCTATTTATCAATGATCTTGCTTATAAAATCAAACTTAACCCTGCAACTGGAGGCTTGTGCTTACCATATTACATGGATTTTGTGGTCTCCACCAAAGAAAACATTTTGACAGTAAGTGTTGATCCAGATCCAGGGGCAAATAGCAGAAATGCAACCTTGAACGGGCTGGAGATAATGAAGATCATCAATGAAGTTAGAAGCTTCCATGGGACAACTCAAGTGGATAGTGTTCTTCCTAACTCATCCCAAAGAAGTGTCAAATTAGCAATTACAGTTTGGTGTAGTACCGGAGCAGCAGCTTTCATAGTTCTCACTGGATTAACTATTTGTTACTTCACAGCTTACAAGTCGAAAGCAAGGTCGAGAGCTACCCCCATATCATGCAAGATTTTTACTTTCCAAGAAATCAGTGAAGCAACGAACACCTTTGATAAGTGCCTGCTTCTTGGAGAAGGTGGTTTTGGCAAGGTCTACAAAGGAACGATGGCTAATGGGATAAAAGTAGCCATCAAGGTAGCCAATCCTGAGTCAAGACAGGGTCTCCGTGAATTTCAGAATGAGATTGAATTGCTATCCAAGCTCTCTCATCCCAACCTTGTCTTCCTAATGGGCTATTGTAATGAAGACTCAGAAATGATCCTGGTCTATGAGTTCTTGGCAAATGGATCTTTAAGTAGCCATCTCTATGGGCCAAACTTTGTTCCTCTTTCATGGAAGCAACGGCTAGAAATATGCATTGGCACTGCAAAGGGCCTTCATTACCTTCACACAGGGGTTCCTCGAAGTACAATCCATCGTGATGTTAAGACAGCAAATATTCTCTTGGATGAGACTTTTGTTCCAAAAGTCGCTGATTTTGGAATCTCTAGACAAGGTCCACCTCTTGATAAGAGCCATGTAACGACCCTTGTTAAGGGCAGTTTCGGTTATCTAGATCCTGAGTATTTCAGAACAAAATTTCTCACAGAAAAATCAGATGTGTTCTCATTTGGAATGGTTCTGATGGAAGTTATCTGTGGCAAGTCTGCTTTAGATGGCACTCGTCCAACAGAGCATATTAATTTGGCAAGATGGGCATCAAGCTGCCAAGAAAAGGGCACCTTTCATGAGATTATAGACCCAAATTTGATAGGAAAAGTGAATTTGGATTCTCTGAACAAGGTGTGTGAGTTGGCCTGGATGTGCTTAGAGGAGAGTCGCAAGAACAGACCACCAATGGGATATTTACTGTGTGAGCTTGAAGACGCTCTCCACATTGAGTTGGCTTCGCCAATTCGGCAAGTTTTTGCGGATTGTGCCATTGATGTGGTTGCAGAAAATGAAATCAGGGATGTGAAGGAACGAGATGATGCCTGA 2310 0.4152 MGMLGIFMWPSFALAFLLSMGNQSSSSFIPVDNYLLACGSSVSITFQGRTFSPESVYENNHALELKSQKSVAVTSNSGAPSPIYQSARIFSSNASYIFRIRHEGRHWIRLYFYPMPTFHQNMSSASITVITDSLVLLDNFTFMEYGGPYLFKEYAIKITSSTLSLTFITSKNSFVFVNAIEVVSVPDDLFANAINITSVSLEDFSEATLETIYRLDMGNEYLNTRNDDSGRNWEGDEKYLSSKSVALNTSVDNSSVYNNSKVVTDKAPAWVYATAKAMADVSRSKLSWVFSVNPNCRYFVRGHFCDIISNPPDVTIFNLFINDLAYKIKLNPATGGLCLPYYMDFVVSTKENILTVSVDPDPGANSRNATLNGLEIMKIINEVRSFHGTTQVDSVLPNSSQRSVKLAITVWCSTGAAAFIVLTGLTICYFTAYKSKARSRATPISCKIFTFQEISEATNTFDKCLLLGEGGFGKVYKGTMANGIKVAIKVANPESRQGLREFQNEIELLSKLSHPNLVFLMGYCNEDSEMILVYEFLANGSLSSHLYGPNFVPLSWKQRLEICIGTAKGLHYLHTGVPRSTIHRDVKTANILLDETFVPKVADFGISRQGPPLDKSHVTTLVKGSFGYLDPEYFRTKFLTEKSDVFSFGMVLMEVICGKSALDGTRPTEHINLARWASSCQEKGTFHEIIDPNLIGKVNLDSLNKVCELAWMCLEESRKNRPPMGYLLCELEDALHIELASPIRQVFADCAIDVVAENEIRDVKERDDA 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1160 769 ProSitePatterns Protein kinases ATP-binding region signature. 467 489 IPR017441 GO:0005524
Prci6g1160 769 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 224 742 - -
Prci6g1160 769 FunFam PTI1-like tyrosine-protein kinase 3 537 739 - -
Prci6g1160 769 ProSiteProfiles Protein kinase domain profile. 461 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1160 769 Pfam Protein tyrosine and serine/threonine kinase 467 725 IPR001245 GO:0004672|GO:0006468
Prci6g1160 769 CDD STKc_IRAK 467 732 - -
Prci6g1160 769 Gene3D - 33 186 - -
Prci6g1160 769 Gene3D - 208 380 - -
Prci6g1160 769 Gene3D Phosphorylase Kinase; domain 1 428 536 - -
Prci6g1160 769 SMART serkin_6 461 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1160 769 FunFam Putative receptor-like protein kinase 33 186 - -
Prci6g1160 769 FunFam receptor-like protein kinase FERONIA 428 536 - -
Prci6g1160 769 SUPERFAMILY Protein kinase-like (PK-like) 440 731 IPR011009 -
Prci6g1160 769 Pfam Malectin-like domain 67 379 IPR024788 -
Prci6g1160 769 Gene3D Transferase(Phosphotransferase) domain 1 537 744 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1160 Prci-Chr6 8228003 8230391 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1160 28 740 Receptor kinase-like Gene Family AT5G59700 42.008 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Prci6g1160 Malectin_like 1.1e-28 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1160 - - pcin:129313301 1534.24