Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1159 ATGGCCAAGCTGGAGCTACTCATATGGATGCCATTTGCTTTAGCTTTTCTTCTAAGCATGGGTAACCAATCATCTTCTCAGTTCATACCTGCTGATAACTACTTACTCGCTTGTGGTTCTTCTGTTAACGTAACCTTTCAGGGCAGGAATTTTTTCGTGAATCTGTCTATGAATAATGATGAATTGGAATTGGAAAGCCAGAAATCTGTTGCTGTTACCTCTGATTCTAGCTCTCCAGCATCGATCTACCAGTCAGCTAGAATCTTTCAGGGCCGCGCTTCGTATATATTCACAATCGAACAGCTAGGCCAGCACTGGATCCGCCTTTACTTCTCCCCTTTGCCCGAATTTCACCAGAACATGTCCTCTGCCTCAATAACAGCCATCGCTGATGGAGTTGTGCTTCTCAATAATTTCAGTTTCATGGAGTATGGTGGTTCTAACTTGATCAAGGAGTATGCAATCGATATTACATCCCCCACCTTGGCTCTCACATTCATCCCTTCTGCAAATTCATTAGTGTTTGTTAACGCAATTGAAGTTGTCTCTATAGCAGGTGATCATGGTATTTATGCAATCAATAATACCTCAGTTCATTCGTTGAGTCTTTCAAAATTTGCCCTTGAAACAGTTTACCGGTTGGATGTGGGTGATGAATCCCTCACCACTCGGAATGATGACCTTGGTCGGGACTGGGAGAGTGATGAAAAATATATGGCCTCCAACAGTCGAGCACTGAATGTTTCAGTAGATCCTGAAGCTATACAAGACAATCCTAGATCAGTTACACATCTCACGGCGCCAAAATGGGTCTATGCTACAGCCAAAGCGATGGCAGATGCAAGAAGCCGCAATCTAAGCTGGGTCTTCCCCGTAAATCCAAACAATAATTATTTTGTTCGGGTGCACTTCTGGGATATCATAAGCAACCTAGAAAATTATGCAATTTTCATTCTATTTATAGATGGTGCTTATGCAACAAGAGTCGACCTTTACTCTCAAGAGTCTTACTCTTATATATACGAGCGACATCACATGGATTTTGTTGTCTCCACAAGAGGAAATAACTTGACAGTAACTGTTGCTCCTGATAGAACGGCAAATAGTACGAATGCAACCATGAACGGGCTGGAGATAATGAAGATCGTCACTGAAGTCAGAACCTTGGATGGACGAGCTCTCGCGAAATTATCAGTAATACTTGGATCCATCTTCGGTGCTACAGCCTTCCTAGTTCTATTTGCAGTAACTTCGTATTACTTGAAAACATGCAGGTCACAGGCAAGCTCCAGAGCCATCACCAGATCATGCAGGCTTTTCACTTTACAAGAAATCAGTGAAGCAACAAACAACTTTGACGAGTGTCTGCTTCTTGGAGAAGGTGGCTTTGGCAAGGTCTACGAAGGAACAATGAATGATGGGGAAAAAGTAGCCATCAAGGTAGCCAATGCCCAATCAAGACAGGGTCTTCGTGAATTTCGGAATGAGATTGAATTGCTATCCAAGCTCTCTCATAAGAATCTTGTCTCTCTGATGGGCTATTGTAATGAAGAAACACAGATGATTCTAGTCTACGAATTCTTGGCGAATGGATCTTTAAGCGGCCATCTCTATGGGACCAACTTTCTTCCTCTATCATGGAAGCAACGACTAGAAATATGCATTGGGACTGCAAAGGGTCTTCATTACCTTCACACAGGGGCGGCTCAAGGCATAATCCATCGTGATGTGAAGACAGCAAATATTCTCTTGAATGAGAATTTTGTTCCAAAAGTCGCTGATTTTGGAATCTCAAGAAAAGGTCCGCCTCTAGAAAAGAGTCATGTAACAACCCTTGTAAAGGGTAGCTTTGGTTATCTAGACCCTGAGTATTTCAGAACAAAATATCTCACAGAGAAATCAGATGTGTTCTCATTTGGGATGGTTCTGATGGAAGTTATTTGTGGCAAGCCTGCTATAGACGACACTCGTCCAACAGAACATATTAATTTGGCAAGATGGGCATCAAGCTGCCAAGATAAGGACACCTTTTATGAGATTATAGACCCAAATTTGATGGGGAAAGTGAACTTAGATTCTCTAAACAAGGTGAGAGAGTTGGCTTGGAAGTGCTTAGAGGAGAGTCGCACAAATAGACCACCAATGGGGTATGTACTGTGCGAGCTTGAAGATGCTCTCCACATTGAGTTGGCTTCGCGAATTCAGCAAGTTTCTATGGATTGTGCCATTGATGTGGTTGTAGAAAATGGAATCAAGGATGAAAAGGAACAATAA 2274 0.4239 MAKLELLIWMPFALAFLLSMGNQSSSQFIPADNYLLACGSSVNVTFQGRNFFVNLSMNNDELELESQKSVAVTSDSSSPASIYQSARIFQGRASYIFTIEQLGQHWIRLYFSPLPEFHQNMSSASITAIADGVVLLNNFSFMEYGGSNLIKEYAIDITSPTLALTFIPSANSLVFVNAIEVVSIAGDHGIYAINNTSVHSLSLSKFALETVYRLDVGDESLTTRNDDLGRDWESDEKYMASNSRALNVSVDPEAIQDNPRSVTHLTAPKWVYATAKAMADARSRNLSWVFPVNPNNNYFVRVHFWDIISNLENYAIFILFIDGAYATRVDLYSQESYSYIYERHHMDFVVSTRGNNLTVTVAPDRTANSTNATMNGLEIMKIVTEVRTLDGRALAKLSVILGSIFGATAFLVLFAVTSYYLKTCRSQASSRAITRSCRLFTLQEISEATNNFDECLLLGEGGFGKVYEGTMNDGEKVAIKVANAQSRQGLREFRNEIELLSKLSHKNLVSLMGYCNEETQMILVYEFLANGSLSGHLYGTNFLPLSWKQRLEICIGTAKGLHYLHTGAAQGIIHRDVKTANILLNENFVPKVADFGISRKGPPLEKSHVTTLVKGSFGYLDPEYFRTKYLTEKSDVFSFGMVLMEVICGKPAIDDTRPTEHINLARWASSCQDKDTFYEIIDPNLMGKVNLDSLNKVRELAWKCLEESRTNRPPMGYVLCELEDALHIELASRIQQVSMDCAIDVVVENGIKDEKEQ 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1159 757 FunFam Putative receptor-like protein kinase 33 185 - -
Prci6g1159 757 CDD STKc_IRAK 458 723 - -
Prci6g1159 757 Gene3D Transferase(Phosphotransferase) domain 1 528 744 - -
Prci6g1159 757 Pfam Malectin-like domain 37 382 IPR024788 -
Prci6g1159 757 FunFam receptor-like protein kinase FERONIA 417 527 - -
Prci6g1159 757 ProSiteProfiles Protein kinase domain profile. 452 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1159 757 FunFam Receptor-like protein kinase FERONIA 528 742 - -
Prci6g1159 757 ProSitePatterns Serine/Threonine protein kinases active-site signature. 572 584 IPR008271 GO:0004672|GO:0006468
Prci6g1159 757 SMART serkin_6 452 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1159 757 SUPERFAMILY Protein kinase-like (PK-like) 429 722 IPR011009 -
Prci6g1159 757 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 246 733 - -
Prci6g1159 757 Gene3D - 206 383 - -
Prci6g1159 757 Gene3D - 33 185 - -
Prci6g1159 757 Gene3D Phosphorylase Kinase; domain 1 416 527 - -
Prci6g1159 757 ProSitePatterns Protein kinases ATP-binding region signature. 458 480 IPR017441 GO:0005524
Prci6g1159 757 Pfam Protein tyrosine and serine/threonine kinase 458 718 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1159 Prci-Chr6 8221121 8223801 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1159 3 731 Receptor kinase-like Gene Family AT5G59700 42.288 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Prci6g1159 Malectin_like 2.8e-25 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1159 - - pcin:129313301 1003.43