Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1158 ATGGGCAAGCTGGAGCTACTCATATGGATGCCATTTGCTTTAGCTTTTCTTCTAAGCATGGGTAACCAATCATCTTCTCAGTTCATACCTGCTGATAACTACCTACTCGCTTGTGGTTCTTCTGTTAACATAACCTTTCAGGGCAGGAAATTTTTTCCTGAATCTGTCTATGAGAATAATGATGAATTGGAATTGAAAAGCCAGAAATCTGTTGCTGTTACCTCTGATTCTAGCTCTCCAGCATCGATCTACCAGTCAGCTAGAATCTTTCAGGGCCGCGCTTCGTATATATTCACAATCGAACAGCTAGGCCAGCACTGGATCCGCCTTTACTTCTCCCCTTTGCCCGAATTTCACCAGAACATGTCCTCTGCCTCAATAACAGCCATCGCTGATGGAGTTGTGCTTCTCAATAATTTCAGTTTCATGGAGTATGGTGGTTCTAACTTGATCAAGGAGTATGCAATCGATATTACATCCCCCACCTTGGCTCTCACATTCATCCCTTCTGCAAATTCATTAGTGTTTGTTAACGCAATTGAAGTTGTCTCTATAGCAGGTGATCATGGTATTTATGCAATCAATAATACCTCAGTTCATTCGTTGAGTCTTTCAAAATTTGCCCTTGAAACAGTTTACCGGTTGGATGTGGGTGATGAATCCCTCACCACTCGGAATGATGACCTTGGTCGGGACTGGGAGAGTGATGAAAAATATATGGCCTCCAACAGTCGAGCACTGAATGTTTCAGTAGATCCTGAAGCTATACAAGACAATCCTAGATCAGTTACACATCTCACGGCGCCAAAATGGGTCTATGCTACAGCCAAAGCGATGGCAGATGCAAGAAGCCGCAATCTAAGCTGGGTCTTCCCCGTAAATCCAAACAATAATTATTTTGTTCGGGTGCACTTCTGGGATATCATAAGCAACCTAGAAAATTATGCAATTTTCATTCTATTTATAGATGGTGCTTATGCAACAAGAGTCGACCTTTACTCTCAAGAGTCTTACTCTTATATATACGAGCGACATCACATGGATTTTGTTGTCTCCACAAGAGGAAATAACTTGACAGTAACTGTTGCTCCTGATAGAACGGCAAATAGTACGAATGCAACCATGAACGGGCTGGAGATAATGAAGATCGTCACTGAAGTCAGAACCTTGGATGGACGAGCTCTCGCGAAATTATCAGTAATACTTGGATCCATCTTCGGTGCTACAGCCTTCCTAGTTCTATTTGCAGTAACTTCGTATTACTTGAAAACATGCAGGTCACAGGCAAGCTCCAGAGCCATCACCAGATCATGCAGGCTTTTCACTTTACAAGAAATCAGTGAAGCAACAAACAACTTTGACGAGTGTCTGCTTCTTGGAGAAGGTGGCTTTGGCAAGGTCTACGAAGGAACAATGAATGATGGGGAAAAAGTAGCCATCAAGGTAGCCAATGCCCAATCAAGACAGGGTCTTCGTGAATTTCGGAATGAGATTGAATTGCTATCCAAGCTCTCTCATAAGAATCTTGTCTCTCTGATGGGCTATTGTAATGAAGAAACACAGATGATTCTAGTCTACGAATTCTTGGCGAATGGATCTTTAAGCGGCCATCTCTATGGGACCAACTTTCTTCCTCTATCATGGAAGCAACGACTAGAAATATGCATTGGGACTGCAAAGGGTCTTCATTACCTTCACACAGGGGCGGCTCAAGGCATAATCCATCGTGATGTGAAGACAGCAAATATTCTCTTGAATGAGAATTTTGTTCCAAAAGTCGCTGATTTTGGAATCTCAAGAAAAGGTCCGCCTCTTGAAAAGAGTCATGTAACAACCCTTGTAAAGGGTAGCTTTGGTTATCTAGACCCTGAGTATTTCAGAACAAAATATCTCACAGAGAAATCAGATGTGTTCTCATTTGGGATGGTTCTGATGGAAGTTATTTGTGGCAAGCCTGCTATAGACGACACTCGTCCAACAGAACATATTAATTTGGCAAGATGGGCATCAAGCTGCCAAGATAAGGACACCTTTTATGAGATTATAGACCCAAATTTGATGGGGAAAGTGAACTTAGATTCTCTAAACAAGGTGAGAGAGTTGGCTTGGAAGTGCTTAGAGGAGAGTCGCACAAATAGACCACCAATGGGGTATGTACTGTGCGAGCTTGAAGATGCTCTCCACATTGAGTTGGCTTCGCGAATTCAGCAAGTTTCTATGGATTGTGCCATTGATGTGGTTGTAGAAAATGGAATCAAGGATGAAAAGGAACAATAA 2277 0.4234 MGKLELLIWMPFALAFLLSMGNQSSSQFIPADNYLLACGSSVNITFQGRKFFPESVYENNDELELKSQKSVAVTSDSSSPASIYQSARIFQGRASYIFTIEQLGQHWIRLYFSPLPEFHQNMSSASITAIADGVVLLNNFSFMEYGGSNLIKEYAIDITSPTLALTFIPSANSLVFVNAIEVVSIAGDHGIYAINNTSVHSLSLSKFALETVYRLDVGDESLTTRNDDLGRDWESDEKYMASNSRALNVSVDPEAIQDNPRSVTHLTAPKWVYATAKAMADARSRNLSWVFPVNPNNNYFVRVHFWDIISNLENYAIFILFIDGAYATRVDLYSQESYSYIYERHHMDFVVSTRGNNLTVTVAPDRTANSTNATMNGLEIMKIVTEVRTLDGRALAKLSVILGSIFGATAFLVLFAVTSYYLKTCRSQASSRAITRSCRLFTLQEISEATNNFDECLLLGEGGFGKVYEGTMNDGEKVAIKVANAQSRQGLREFRNEIELLSKLSHKNLVSLMGYCNEETQMILVYEFLANGSLSGHLYGTNFLPLSWKQRLEICIGTAKGLHYLHTGAAQGIIHRDVKTANILLNENFVPKVADFGISRKGPPLEKSHVTTLVKGSFGYLDPEYFRTKYLTEKSDVFSFGMVLMEVICGKPAIDDTRPTEHINLARWASSCQDKDTFYEIIDPNLMGKVNLDSLNKVRELAWKCLEESRTNRPPMGYVLCELEDALHIELASRIQQVSMDCAIDVVVENGIKDEKEQ 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1158 758 FunFam Putative receptor-like protein kinase 33 186 - -
Prci6g1158 758 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 262 734 - -
Prci6g1158 758 Pfam Malectin-like domain 66 383 IPR024788 -
Prci6g1158 758 ProSiteProfiles Protein kinase domain profile. 453 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1158 758 FunFam Receptor-like protein kinase FERONIA 529 743 - -
Prci6g1158 758 SUPERFAMILY Protein kinase-like (PK-like) 430 723 IPR011009 -
Prci6g1158 758 FunFam receptor-like protein kinase FERONIA 418 528 - -
Prci6g1158 758 Pfam Protein tyrosine and serine/threonine kinase 459 719 IPR001245 GO:0004672|GO:0006468
Prci6g1158 758 Gene3D Phosphorylase Kinase; domain 1 417 528 - -
Prci6g1158 758 Gene3D Transferase(Phosphotransferase) domain 1 529 745 - -
Prci6g1158 758 CDD STKc_IRAK 459 724 - -
Prci6g1158 758 Gene3D - 207 384 - -
Prci6g1158 758 Gene3D - 33 186 - -
Prci6g1158 758 SMART serkin_6 453 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1158 758 ProSitePatterns Protein kinases ATP-binding region signature. 459 481 IPR017441 GO:0005524
Prci6g1158 758 ProSitePatterns Serine/Threonine protein kinases active-site signature. 573 585 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1158 Prci-Chr6 8195941 8198527 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1158 3 732 Receptor kinase-like Gene Family AT5G59700 41.902 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Prci6g1158 Malectin_like 1.2e-24 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1158 - - pcin:129313301 1025.77