Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1157 ATGGGCATGCTGGAGCTGTTCATGTGGATGCCACTTGCTTTGGCTTTTCTTCTAAGCATGGGTGATGAATCATCTTCCTCATTCCTACCCGTTGATAATTACTTGCTCGCTTGTGGTTCTCCTGTTGACATACACTTTCAGGGTCGCACTTTTTTCCGTGAATCTGTCTTTGAGACACATGCATTAGAATTGAAAACCCAGCAGGAATCTGCTGCTGTTACCTCTGATTCTGGTGCTCCATCTCCAATCTACCAGTCAGCTAGAATCTTTTGGGGCCGTGCTTCATATATTTTCAGCATTCGACAGCCAGGCCAGCACTGGATCCGCCTTTTCTTCTATCCTTTTCCCAACTCTCACCAGAACTTGTCATCTGCCTCAATAACAGTAATAGCTGATAGTGCAGTGCTTCTCAAAGATTTCACTTTCACAGAGTATGATCATTCATACGTGTTCAAGGAGTATGCAGTCAACATTCCATCTCCCACCTTGTCTCTCACATTCATTCCTTCTGGAAACTCTTTTGTGTTTGTTAATGCAATTGAAGTTGTCTCTGTACTGAGTAATCTCTCTGTTCCCAATGATTTCTCTTTGGAGCATCATTCAGAAGTGGTCCTTGAGACTGCTTACCGGTTGGATGTGGGCTATAAATCTCTGGCCACTCGGAATGACTACCTTGGTCGGAACTGGGAGGGTGATGAAACATACTTGGCCTCCAACACTAGGGCACTGGATATTTCAGTTGATCCTTATTATATACATGATAATTCCGAATCAACCATACCTGCCATAGCACCAAAATGGGTTTATGCTACAGCCAAAGCCATAGCAGATGCACGAAGTCCCAATTTAAGTTGGGTCTTCCCTGCAAATCCAAACTATAGGTATTTTGTCCGGGTGCATTTCTGTGATGTCATAAACATAACAAATTTTAATCTATTCATAAATGATGTTGCTTATAAAAGAGTTGACTTTCTCTCTAAATTTCGTCAGTTTTCTGTGCCGCATTACCTGGATTTTGTTGTCTCCACAAGAGGAAACAATTTGAGAGTAAGTGTTGCTCCTGATAGAACGGCAAATAGTACAAACGCAATCCTGAACGGGCTGGAGATAATGAAGGTCATCAATCAAGTTAGAACCTTGGATCGACGGACATTATCAATTATAGTTAAATCTATCTTCGGTGCTGTAGCTTTCCTAGTTCTCACTACAGTAGCTTTATATTACTTAAAAGCTTATAGGTCAAGGCGAGCTTCAGAACTACCCCGATTTCATGCAGGCTTCACTTTACAAGAAATCCGTGAAGCAACAAATAACTTTGACCAGTGTCTGCTTCTTGGAGAAGGTGGCTTTGGCAAGGTCTACGAAGGAACAATGGATACTGGGAAAAAAGTAGCGATCAAAGTAGCCAATCCCCATTCAAGACAAGGTTTTCAAGAATTTCAGAATGAGATTGAACTACTATCCAAGCTCTCTCATCAGAACCTTGTCTCTCTAATAGGCTGTTGTAATGGAGACTCGCAAATGATTCTAGTCTATGAACTCTTGGCAAATGGATCTTTAAGTGGCCATCTCTATGGGACAAACTTTGTTACTCTTTCATGGAGGCAACGACTAGAAATATGCATTGGGACTGCAAAGGGTCTTCATTACCTTCACACAGGGGCTGCTCGAAGTATAATCCATCGTGATGTTAAGACAGCAAATATTCTCTTGAATGAGAATTTTGTTCCAAAACTTGCTGATTTTGGCATCTCTAGAAAAGGCCCACCCCTTGACAAGAGCCATGTAACAACCCTTGTAAAGGGCAGCTTCGGTTACTTGGATCCGGAATATTTCAGAACAAAATATCTCACGGAGAAATCAGATGTGTTCTCATTTGGGATGGTTCTGATGGAAGTTCTTTGTGGCAAGCCTGCTTTAGATGACACTCGTCCTACAGAACACATTAATTTGGCAAAATGGGCATCAAGCTTCCAAGAAAAGGGCACCTTTCCAGAGATCATAGACCCCTTTTTGATTGGGCAAGTGAACTTGGATTCCTTGAACAAGGTATGTAAGCTGGCTTGGAAGTGCTTAGAGGAGAGTCGCAAAAACAGGCCACCAATGGGGTACGTACTGTTTGAACTAGAAGACGCTCTCCACCTAGAGTTGGCTTCACCTCTCTGGCAAGTTTATGTGCACTGTGCCATTGATGTGGTTGCAGAAAATGGAATCAACGATGAGAAGGAACAAGATGTTGCTTGA 2244 0.4238 MGMLELFMWMPLALAFLLSMGDESSSSFLPVDNYLLACGSPVDIHFQGRTFFRESVFETHALELKTQQESAAVTSDSGAPSPIYQSARIFWGRASYIFSIRQPGQHWIRLFFYPFPNSHQNLSSASITVIADSAVLLKDFTFTEYDHSYVFKEYAVNIPSPTLSLTFIPSGNSFVFVNAIEVVSVLSNLSVPNDFSLEHHSEVVLETAYRLDVGYKSLATRNDYLGRNWEGDETYLASNTRALDISVDPYYIHDNSESTIPAIAPKWVYATAKAIADARSPNLSWVFPANPNYRYFVRVHFCDVINITNFNLFINDVAYKRVDFLSKFRQFSVPHYLDFVVSTRGNNLRVSVAPDRTANSTNAILNGLEIMKVINQVRTLDRRTLSIIVKSIFGAVAFLVLTTVALYYLKAYRSRRASELPRFHAGFTLQEIREATNNFDQCLLLGEGGFGKVYEGTMDTGKKVAIKVANPHSRQGFQEFQNEIELLSKLSHQNLVSLIGCCNGDSQMILVYELLANGSLSGHLYGTNFVTLSWRQRLEICIGTAKGLHYLHTGAARSIIHRDVKTANILLNENFVPKLADFGISRKGPPLDKSHVTTLVKGSFGYLDPEYFRTKYLTEKSDVFSFGMVLMEVLCGKPALDDTRPTEHINLAKWASSFQEKGTFPEIIDPFLIGQVNLDSLNKVCKLAWKCLEESRKNRPPMGYVLFELEDALHLELASPLWQVYVHCAIDVVAENGINDEKEQDVA 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1157 747 CDD STKc_IRAK 445 710 - -
Prci6g1157 747 Pfam Protein tyrosine and serine/threonine kinase 445 653 IPR001245 GO:0004672|GO:0006468
Prci6g1157 747 Gene3D - 204 374 - -
Prci6g1157 747 Gene3D - 33 185 - -
Prci6g1157 747 Gene3D Transferase(Phosphotransferase) domain 1 515 719 - -
Prci6g1157 747 Gene3D Phosphorylase Kinase; domain 1 404 514 - -
Prci6g1157 747 ProSitePatterns Protein kinases ATP-binding region signature. 445 467 IPR017441 GO:0005524
Prci6g1157 747 FunFam Putative receptor-like protein kinase 33 186 - -
Prci6g1157 747 FunFam Receptor-like protein kinase FERONIA 515 724 - -
Prci6g1157 747 SMART serkin_6 439 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1157 747 ProSitePatterns Serine/Threonine protein kinases active-site signature. 559 571 IPR008271 GO:0004672|GO:0006468
Prci6g1157 747 SUPERFAMILY Protein kinase-like (PK-like) 423 714 IPR011009 -
Prci6g1157 747 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 254 711 - -
Prci6g1157 747 Pfam Malectin-like domain 79 373 IPR024788 -
Prci6g1157 747 ProSiteProfiles Protein kinase domain profile. 439 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1157 747 FunFam receptor-like protein kinase FERONIA 408 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1157 Prci-Chr6 8173292 8175537 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1157 28 718 Receptor kinase-like Gene Family AT3G46290 41.854 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Prci6g1157 Malectin_like 1.4e-27 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1157 - - pcin:129313301 991.875