Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1155 ATGCCATCTCTTGATAACTACTTGATTGCTTGCGGTTCTTCTCAAAACATTACTCATCATGGTCGAACTTTTCTTCCTGATTCTCAACATCCCTCTGTTAGATCTGATTATGAACATTCTGATTCTCTATCTAATTCTTCTATCTCTGTCTCTCCGATTTACCAATCTGCAAGAACTTTCACAGCCTCAGCTTCTTACAACTTTGACGTCAACCACAAGGGCTGGCATTTCATCCGACTCTACTTTCATCCTCTTTCTGAACGGTTAGCTTCTGTCTCATTCAGTGTCGTCACTGAAACCCACGTTCTTCTTGATAGCTTTAGATTCAACACTTCTGATAATAAATCTTACTCATCGTTCAGGGAGTATGCGATATATGTGAATACTAACCTTTTAATCCTCACTTTTGTTCCTTCTAGCGATTCCGATATTGCATTTGTGAATGCCATTGAGGTTCTTTCTGTCCCAGACGAGGTATTCTCTTTTAATCATACCTTATCTTTCCCAATGTTCAAAGATGTTTCTCTTGAAACCATGTACCGCTTGAACATGGGAGGTCCCTCTTTTGTCCCTTGTCAAAATGACACTCTTTTCAGAGTTTGGGAAGAGGACGATAAGTACCTCAAGCACAATCCTTCAGCTCTTAATCTTTCTGTGAACCCACACTCCGCAAAAGCCTTTCAAAAAAACATGTCAAGCGCGTCCAATTTGACTTGGGTCTTCCCTGTCAATCCAAAGTTCAAATACATTCTGAGAATTCATTTCTGCGATATGATTAGCAAGTCCAGAAACAGCTTGTTTTTCAACGTGTACGTAAATTCTGATCTTGTCATGAAAAATCTAAATCTATCAGCATTTACTCATGATGTTGGCGTTCCATACGTCATCGACTGTGTCACCAATATCACTTCTGAAGATTCAGATACATTATTGAGTGTCACTGCCGAAGCTAGCGGCTTTGATCATCAGAGCCTTAAAGCTACGTTGAACGGGCTAGAGATTATGAAGATGAGAAACGCCATGAGAAGCTTGGATGAGCTGTCCTCTCATGATAATAATATAACTCCAAAAAAGTCAGCTTTGAAAATCCCAAAAGTAGCAATAATCCTCTTGAGCAGTTGCATGGCTGCTGCTTCTTTGTTCGTAGGTGCTTTTTATTATTGTCGATGCCTAAGAGCTGGTAGTTCCAAATCCAATAACGGAAATGTAAGACTCAGAATATTCACTTTCCAGGAGATTCAAGAAGCAACCAACAATTTCGATGAGAGATATCATATCGGAAATGGTGGTTTTGGGAAAGTGTTCATGGGACATCTCAAAGATGGTACGAAGGTTGCGATCAAGAGAGCAAACCCTCAATCCAATCAAGGCATTGCCGAGTTCCAGAACGAGATCAAATTCTTATCGAAACTTCGTCACCAAAATCTCGTCTCTCTTCTCGGATACTGCTACGAGGATAAGCAAATGGCTCTGGTTTATGCCTACATGGCAGGTGGGTCTCTCAACAGCCATCTCCACGGGGAAAACGTCGTCGTTCCACTGACATGGAAGCAAAGGCTTGAGATTTGCATAGGAGCTGCAAGAGGGCTTCATTATCTTCACACTGGAGCTTCTCAAAGCATAATCCACAGAGACGTGAAGTCAGCGAATATTCTGTTGGATGAGAACTTTGTTGCCAAAGTTTCAGACTTTGGGATCTCACGGAACGGCCCATCTTCTGATAAGTCCCACGTGAGCACTATTGTGAAGGGAAGCTTTGGCTACTTAGATCCTGAGTACTTCAGAACGCAGCATTTAACAGAGAAATCAGATGTGTTTTCATTTGGAATGGTGCTTCTGGAAGTTCTATGTGGGAGGCCTGCTCTGAATTGTTCTCTGCCAGACGAAGAAAAAAATTTGGCAAGCTGGGCATTAAGCAAAGTCGAAAACGACGAGTCGTCGCTGCAAGAGATAATAGAGCCGAGTCTAATTGGGAAGGCGAATCATGAATCTTTGAAGGTGGTGTGGGAATTGGCTAACATGTGCTTGGAGCGAAGGATCAACAGACCAACAATGGGATACATCATGTTATGCTTGCAAGATGCTCTTTACCTTCATCTCAGTACAGAAAATGAAGCCTAG 2121 0.4196 MPSLDNYLIACGSSQNITHHGRTFLPDSQHPSVRSDYEHSDSLSNSSISVSPIYQSARTFTASASYNFDVNHKGWHFIRLYFHPLSERLASVSFSVVTETHVLLDSFRFNTSDNKSYSSFREYAIYVNTNLLILTFVPSSDSDIAFVNAIEVLSVPDEVFSFNHTLSFPMFKDVSLETMYRLNMGGPSFVPCQNDTLFRVWEEDDKYLKHNPSALNLSVNPHSAKAFQKNMSSASNLTWVFPVNPKFKYILRIHFCDMISKSRNSLFFNVYVNSDLVMKNLNLSAFTHDVGVPYVIDCVTNITSEDSDTLLSVTAEASGFDHQSLKATLNGLEIMKMRNAMRSLDELSSHDNNITPKKSALKIPKVAIILLSSCMAAASLFVGAFYYCRCLRAGSSKSNNGNVRLRIFTFQEIQEATNNFDERYHIGNGGFGKVFMGHLKDGTKVAIKRANPQSNQGIAEFQNEIKFLSKLRHQNLVSLLGYCYEDKQMALVYAYMAGGSLNSHLHGENVVVPLTWKQRLEICIGAARGLHYLHTGASQSIIHRDVKSANILLDENFVAKVSDFGISRNGPSSDKSHVSTIVKGSFGYLDPEYFRTQHLTEKSDVFSFGMVLLEVLCGRPALNCSLPDEEKNLASWALSKVENDESSLQEIIEPSLIGKANHESLKVVWELANMCLERRINRPTMGYIMLCLQDALYLHLSTENEA 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1155 706 SMART serkin_6 420 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1155 706 Gene3D Phosphorylase Kinase; domain 1 393 495 - -
Prci6g1155 706 CDD STKc_IRAK 426 686 - -
Prci6g1155 706 Pfam Malectin-like domain 9 337 IPR024788 -
Prci6g1155 706 PANTHER OS07G0166700 PROTEIN 405 698 IPR045272 GO:0004714|GO:0006468
Prci6g1155 706 Gene3D Transferase(Phosphotransferase) domain 1 496 703 - -
Prci6g1155 706 ProSiteProfiles Protein kinase domain profile. 420 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1155 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 541 553 IPR008271 GO:0004672|GO:0006468
Prci6g1155 706 FunFam receptor-like protein kinase FERONIA 389 495 - -
Prci6g1155 706 SUPERFAMILY Protein kinase-like (PK-like) 400 691 IPR011009 -
Prci6g1155 706 Gene3D - 6 155 - -
Prci6g1155 706 Gene3D - 174 339 - -
Prci6g1155 706 ProSitePatterns Protein kinases ATP-binding region signature. 426 448 IPR017441 GO:0005524
Prci6g1155 706 FunFam Wall-associated receptor kinase 2 496 706 - -
Prci6g1155 706 Pfam Protein tyrosine and serine/threonine kinase 425 620 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1155 Prci-Chr6 8111577 8113697 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1155 5 699 Receptor kinase-like Gene Family AT4G39110 43.233 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Prci6g1155 Malectin_like 2.5e-26 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1155 - - pcin:129313295 1405.96