Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1146 ATGAACGGGAAGGCCAACGTTTCTAAAGAGCTCAACGCAAAGCATAAAAAGATATTGGAAGGACTTCTTAAACTGCCAGAAAATAGGGAATGTGCCGATTGCAAAGCTAAAGGTCCAAGATGGGCAAGTGTGAACCTAGGCATCTTTATCTGCATGCAGTGTTCAGGAATACATCGAAGTCTTGGGGTTCATATTTCAAAGGTATGTTATGTTGATTATAATGATGTCTCAATTTATATGATACCATATAAGTAG 255 0.3843 MNGKANVSKELNAKHKKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVCYVDYNDVSIYMIPYK 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1146 84 SUPERFAMILY ArfGap/RecO-like zinc finger 15 77 IPR037278 -
Prci6g1146 84 CDD ArfGap 19 68 - -
Prci6g1146 84 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 84 IPR001164 GO:0005096
Prci6g1146 84 Pfam Putative GTPase activating protein for Arf 17 71 IPR001164 GO:0005096
Prci6g1146 84 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Prci6g1146 84 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Prci6g1146 84 SMART arf_gap_3 16 78 IPR001164 GO:0005096
Prci6g1146 84 Gene3D Arf GTPase activating protein 1 80 IPR038508 -
Prci6g1146 84 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 68 IPR044520 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1146 Prci-Chr6 8058195 8059983 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1146 16 77 C2H2 Transcription Factor Family AT4G05330 54.839 2.64e-21 83.6