Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1142 ATGAACGGGAAGGCCAACGTTTCTAAAGAGCTCAACGCAAAGCATAAAAAGATATTGGAAGGACTTCTTAAACTGCCAGAAAATAGGGAATGTGCCGATTGCAAAGCTAAAGGTCCAAGATGGGCAAGTGTGAACCTAGGCATCTTTATCTGCATGCAGTGTTCAGGAATACATCGAAGTCTTGGGGTTCATATTTCAAAGGTTCGGTCTGCAACTCTGGACACCTGGCTTCCAGAGCAGGTTGCGTTCATTCAATCCATGGGAAATGAGAAAGCTAATTCTTACTGGGAAGCAGAGCTACCCCCAAATTATGATAGAGTTGGAATCGAGAATTTTATTCGTGCAAAGTATGAAGAGAAGAGATGGATTCCGAGGGATGGAAAACTAAAATCACCTTCTGGGGAGCAGGAAGACAGGACTTCTTCAAATTGGCAGAGGCCTGCCGAAAGAAGTGGGCATGGTTTTACATCTGCTTCTGAGAACACTTTTCATGAAAAGAAGAAAATTCAGGCAACAAATACAATTCCTGCAACAAGAAATAATGTTCCTGCTCCTCCAAAAGTACCTGAACAGGTATCTCCTGCGAAACCTCAGCATGTAGAGAAAGTGGAACCTGTGGGTCCAGAACTGCAAACTGAGTCAACTAAACAGGCTACGGATGTGGCTCAGAATACCCCTTCAAAAGTTGACTATGCGACGGACCTTTTCAACTTGTTATCCATGGATGGCCCAGGTGAAAATGGCTCAGAGGAAGCTGGTACTACTACTGGCGATAGTGACTGGGAAGGTTTTCAGTCCGCTGCAGAAGCATCGACAACTGAGAAGGCTGGTTCCACAAGAGTAGTAGAGAGCACTCCCAAGTCTAATTCTGGAATTGAGGATCTATTTAAGGATTCACCTTCAGTGACTCCTTTAGTTCCAGAAAAACCACTGAAAGATTTGAAAAATGATATCATGAACCTCTTTGAAAAGTCCAACATGGTCTCTCCATTTTCTGCACACCAGCAGCAGCTTGCTATGCTTGCACAGCGACAGTCCCTTCTAATGGCTGCTTCAGCCAACTCTGCTGGAGGGAACCCCACGTATCCTGATAGTATACAACAACTTGGACTGAATGGATCCAATATTCCTGTCCCAAGTTGGCCAGCTGCTGGTTACCCAATTCCTGGAGCATTGCCGATGGCTGGTCAGGGAGAGCTGCAGAAACTTATGCAGACTAGGAGCACGACTCCAGCACATCTGCCGTTGAATTCTGTGCAGTATCCAATATCTAGTTTCTATACAATGGGACAGGTTAGACCAGTTAATGGTGTGACGACGATGGGAGCGAGTAAAGCTCCGCCAGCAGCTTCAATGGCGTCATCAACCTCCTCACAGGCACCTAAGGACTATGACTTCTCCTCTTTAACGCAAGGGATGTTTGCCAAACACTGA 1434 0.4575 MNGKANVSKELNAKHKKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPNYDRVGIENFIRAKYEEKRWIPRDGKLKSPSGEQEDRTSSNWQRPAERSGHGFTSASENTFHEKKKIQATNTIPATRNNVPAPPKVPEQVSPAKPQHVEKVEPVGPELQTESTKQATDVAQNTPSKVDYATDLFNLLSMDGPGENGSEEAGTTTGDSDWEGFQSAAEASTTEKAGSTRVVESTPKSNSGIEDLFKDSPSVTPLVPEKPLKDLKNDIMNLFEKSNMVSPFSAHQQQLAMLAQRQSLLMAASANSAGGNPTYPDSIQQLGLNGSNIPVPSWPAAGYPIPGALPMAGQGELQKLMQTRSTTPAHLPLNSVQYPISSFYTMGQVRPVNGVTTMGASKAPPAASMASSTSSQAPKDYDFSSLTQGMFAKH 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1142 477 CDD ArfGap 19 117 - -
Prci6g1142 477 MobiDBLite consensus disorder prediction 443 464 - -
Prci6g1142 477 Pfam Putative GTPase activating protein for Arf 17 123 IPR001164 GO:0005096
Prci6g1142 477 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Prci6g1142 477 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Prci6g1142 477 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Prci6g1142 477 MobiDBLite consensus disorder prediction 449 464 - -
Prci6g1142 477 FunFam stromal membrane-associated protein 1 isoform X1 1 128 - -
Prci6g1142 477 MobiDBLite consensus disorder prediction 242 308 - -
Prci6g1142 477 MobiDBLite consensus disorder prediction 136 159 - -
Prci6g1142 477 Gene3D Arf GTPase activating protein 2 129 IPR038508 -
Prci6g1142 477 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 477 IPR044520 GO:0005096
Prci6g1142 477 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
Prci6g1142 477 SUPERFAMILY ArfGap/RecO-like zinc finger 15 124 IPR037278 -
Prci6g1142 477 MobiDBLite consensus disorder prediction 249 296 - -
Prci6g1142 477 SMART arf_gap_3 16 130 IPR001164 GO:0005096
Prci6g1142 477 MobiDBLite consensus disorder prediction 125 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1142 Prci-Chr6 8033265 8039984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1142 16 134 C2H2 Transcription Factor Family AT4G05330 46.457 3.18e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1142 K12486 - gmx:100789910 684.1