Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1136 ATGATGTTATCAGCATCGCCATCCTCGCTAGCGAGGAGTTCGCTAGAGGTAATGCTTGAATCGCTCCAGCAGAGAGAAGAAGAAGAGAATAAGCCAAAGGACTTGCCACCGGCATTGCCAGCTCGCCCGACCTCCAAAGCTCGGCTTCCCTCAGCGAGAAGGTCATTGCCGAATAACTTCAACTTTAAGGTTAACGGAGATCCTGGTGAGACAGAATACCTTCCGAACGGATTTCATGATGCGAACGAAGAAACCAAGAGGAAAGATACGGTTGATTTGGGACACAAGAGAAACGGAAGCCTTGGGAGCAAGAAGTTGAAGAGGGATGTGGAATGTCCGTACGCCCTTGCATCGGAAGATAACGTTACTTATTTCAACAAGAAGAACCTTCATGTTTGGTGTAGGCAACCAGATGGGCACTGGGGACTTGGAAAGATACAGTCAACTTCAAAAGAAGAAACTTTAGTTTTACTCACAAATGGAAATGTTATGAAAGTGGCCAGATCAGAACTCCTACCAGCTAATCCAGACATTTTAAAAGGCGTTGACGATCTCATACAGCTGAGTTACCTGAATGAGCCATCTGTTCTTCACACTCTTCAGTTTAGATATTCTCAAGAAATGATTTATAGTAAAGCAGGACCCATTTTAATAGCACTCAATCCCTTCAAAGATGTTCAGATTTGTGGAAATGATTTTTCCACAACTTATAGACAGAAATGTTTGAATGATCCACATGTTTATTCTGTGGCAAATGCAGCTTATAATGAGATGATGAGAGATAAAGCAGATCAGTCCATCATCATAAGTGGTCAGAGTGGATCTGGGAAAACAGAGACAGCAAAAATTGCTATGCAATATTTGGCTGCTCTGGGTGGTAGAAGCTGTGGTATAGAAAATAAAATCCTTCAGACGCATTTCATTCTAGAAGCTTTTGGGAATGCAAAAACATCAAGGCACAACAATTCTAGCAGATTTGGGAAGTTAACTGAAATTCATTTCACTGCAGCAGGGAAAGTATGTGGAGCTAAAATTCAAACCTTCATGTTACAAAAGTCGAGAGTTGTTCAGCTGACCAGTGGTGAGAGGTCATATCACATCTTTTATCAACTTTGTGCTGGATCTTTACCTGGCCTTAAAGAGAGGCTGAACCTTAGAGGGGCCAGCGAATATAAATATCTTAATCAGAGTGACTGTATGACAATAGATGGGGTTGATGATGCTAAAATGTTAAATAAACTGCTGAAAGCATTGGATGTTGTTCAAATTTGCAAAGAGGATCAAGAGCTAGTATTTAAAATCCTTGCTGCAATATTATGGCTTGGAAATGTATCATTTCAAATATCTGACAATGAAAATCATGTTGTAGTGGTGGATGATGAAGCTGTCACCAGCGCAGCCATGCTGATGGGTTGCAGTTCCCAAGACTTGATGGTAACTTTATCTACTTGTAAGGTCCAAGCTGGCAAGGATACTAATGCTAAAAGCTTGACATTGAAGAAGGCAATTGAAACAAGAGATGCATTGGCACAATTCATGTATGCAAGCTTGTTTGGGTGGCTCATAGAACAAATTAACAAGTCACTAGGAGCTGGCAAACGGCATACTGGGAGATCCATAAATATTCTTGATATTTGTGGGTTTGAATCACTCAAGAAAAACAGCTTTGAACAATTTTGTGTAAATTATGCTAGCGAGAGGCTTCAACAACATTTCATTTGGCATATGTTTAAACTTGAGCAGGAGAGCTACGAAATGGATGGTGTTCATTGGACTAAAGTAGATTTTGAGGACAATCAAGAGTGCTTGGATCTATTTGAGAAGAAGCCATCAGGGATACTTTGTTTGTTGGATGAGGAATCAAATTTGCCCAAGGCTACAGATCTCACTTTTGCCAGCAAACTTAAACAGCACCTGAATGCTAATCCTTGCTTTAAAGGGGAAAGAGGGAGAGCTTTTGGTGTTCGTCACTTTGCAGGAGAGGTTTTGTATGATACAAACGGCTTTCTACAGCAGAACAAAGATCTGCTGCCTTCTGATTACATGCAATTCCTGGCGTCATTTAGTTGTCAGCTGCTGCAGTTGTTCTCGAAAATGCTTAGTCAAACACAGGAACAGTTGAATTCCTTCCAACTAGGTGCGCTAGACTCGCAGAAGCAGAGTGTTGGTGCAAAGCTGAAGGGCCAGTTGCTTGAATTAATGCACCAATTGGAGAATACCGCACCTCATTATATTCACTGCATAAGGCCAAATGCTAAGCAGCTTCCTGGCATATTTGATGAAGATCTTGTCATGCAACAGCTCCGTTGCTGTGGCGTCTTGGAGGTTGTTAGAATTTCAAGGATTGGATATCCTATCCAAATGACGCATCAAGAGTTTGCTGACAGGTATGGGTTTCTGCTTTTGGAGCCCTGTGCATTTCAGGATCCACTAAGCATCTCAGTTGCTATACTTAAACAGTTTAATATCCCTCCCGAAATGTATCAGTTTGGCTACACCAAAGTGCATTTGCGAAAAGGGCAGATTGGTGCATTGGAGGATAGAAGAAAACAGATTATGCAGGGAATACTTCAGATTCAAAAATGGTTCCGTGGTCATCAAGCCCGTAGACATGTCCATGAACTTAAGAATGGAGTGACGGCATTGCAGTCATTTGCTCGTGGAGAAATTTTGAGGAGTAAATATGGTATAGTTGACAGGTCTTCTATAACTATTGATTGTAAAAATTTTGAGGAGATTGAGGCAATCATACTGCTACAAGCAGTAATTCGTGGTTGGCTGGCTAGGAGGAGGAATGCTAATGGTTTGCGTAAGGTGAAGAAACACCCTAGTGATGAAAAACTTCAGCGATATTCTCGTGGGAAGATGTTTGATATGAAGATGGGGCCAATAACAAATTCTTACGTACCAGGTAGATATACAGACAGAAGAGTTCTCCCAAGTGTAGTAGGTAGCCATGATCATGAGTTCGTTGGGGAAAGTATGTCAAGAAATTTCATGCTTCAATTTTATTGA 3015 0.4123 MMLSASPSSLARSSLEVMLESLQQREEEENKPKDLPPALPARPTSKARLPSARRSLPNNFNFKVNGDPGETEYLPNGFHDANEETKRKDTVDLGHKRNGSLGSKKLKRDVECPYALASEDNVTYFNKKNLHVWCRQPDGHWGLGKIQSTSKEETLVLLTNGNVMKVARSELLPANPDILKGVDDLIQLSYLNEPSVLHTLQFRYSQEMIYSKAGPILIALNPFKDVQICGNDFSTTYRQKCLNDPHVYSVANAAYNEMMRDKADQSIIISGQSGSGKTETAKIAMQYLAALGGRSCGIENKILQTHFILEAFGNAKTSRHNNSSRFGKLTEIHFTAAGKVCGAKIQTFMLQKSRVVQLTSGERSYHIFYQLCAGSLPGLKERLNLRGASEYKYLNQSDCMTIDGVDDAKMLNKLLKALDVVQICKEDQELVFKILAAILWLGNVSFQISDNENHVVVVDDEAVTSAAMLMGCSSQDLMVTLSTCKVQAGKDTNAKSLTLKKAIETRDALAQFMYASLFGWLIEQINKSLGAGKRHTGRSINILDICGFESLKKNSFEQFCVNYASERLQQHFIWHMFKLEQESYEMDGVHWTKVDFEDNQECLDLFEKKPSGILCLLDEESNLPKATDLTFASKLKQHLNANPCFKGERGRAFGVRHFAGEVLYDTNGFLQQNKDLLPSDYMQFLASFSCQLLQLFSKMLSQTQEQLNSFQLGALDSQKQSVGAKLKGQLLELMHQLENTAPHYIHCIRPNAKQLPGIFDEDLVMQQLRCCGVLEVVRISRIGYPIQMTHQEFADRYGFLLLEPCAFQDPLSISVAILKQFNIPPEMYQFGYTKVHLRKGQIGALEDRRKQIMQGILQIQKWFRGHQARRHVHELKNGVTALQSFARGEILRSKYGIVDRSSITIDCKNFEEIEAIILLQAVIRGWLARRRNANGLRKVKKHPSDEKLQRYSRGKMFDMKMGPITNSYVPGRYTDRRVLPSVVGSHDHEFVGESMSRNFMLQFY 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1136 1004 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 127 176 IPR004009 GO:0003774|GO:0005524|GO:0016459
Prci6g1136 1004 ProSiteProfiles IQ motif profile. 852 881 IPR000048 GO:0005515
Prci6g1136 1004 ProSiteProfiles IQ motif profile. 912 941 IPR000048 GO:0005515
Prci6g1136 1004 Gene3D - 854 901 - -
Prci6g1136 1004 MobiDBLite consensus disorder prediction 1 20 - -
Prci6g1136 1004 Gene3D - 784 851 - -
Prci6g1136 1004 MobiDBLite consensus disorder prediction 21 35 - -
Prci6g1136 1004 PRINTS Myosin heavy chain signature 210 229 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci6g1136 1004 PRINTS Myosin heavy chain signature 264 289 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci6g1136 1004 PRINTS Myosin heavy chain signature 307 334 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci6g1136 1004 PRINTS Myosin heavy chain signature 592 620 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci6g1136 1004 PRINTS Myosin heavy chain signature 539 567 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci6g1136 1004 Pfam Myosin head (motor domain) 182 838 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci6g1136 1004 Gene3D Myosin VI head, motor domain, U50 subdomain 420 528 - -
Prci6g1136 1004 ProSiteProfiles Myosin motor domain profile. 180 850 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci6g1136 1004 Gene3D - 363 419 - -
Prci6g1136 1004 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 932 IPR027417 -
Prci6g1136 1004 CDD MYSc_Myo8 194 838 IPR036022 -
Prci6g1136 1004 PANTHER MYOSIN 173 942 - -
Prci6g1136 1004 MobiDBLite consensus disorder prediction 77 102 - -
Prci6g1136 1004 MobiDBLite consensus disorder prediction 51 65 - -
Prci6g1136 1004 FunFam Myosin heavy chain 363 419 - -
Prci6g1136 1004 Gene3D Kinesin motor domain 179 783 IPR036961 -
Prci6g1136 1004 MobiDBLite consensus disorder prediction 1 102 - -
Prci6g1136 1004 Gene3D - 551 740 - -
Prci6g1136 1004 SMART iq_5 911 933 IPR000048 GO:0005515
Prci6g1136 1004 SMART iq_5 851 873 IPR000048 GO:0005515
Prci6g1136 1004 SMART iq_5 874 896 IPR000048 GO:0005515
Prci6g1136 1004 Pfam IQ calmodulin-binding motif 914 931 IPR000048 GO:0005515
Prci6g1136 1004 Pfam IQ calmodulin-binding motif 856 872 IPR000048 GO:0005515
Prci6g1136 1004 SMART MYSc_2a 174 851 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1136 Prci-Chr6 7989175 7999449 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1136 1 930 Myosins gene family AT5G54280 60.910 0.0 1203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1136 K10357 - gmx:100819335 1333.55