Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1134 ATGGCATCCACGTTCATGGCAGCCTCAGCAAGCTCTAGCACTGTTCTTAAACCTTCCCCTTTTCTGGGTCAAACCAGATCATCCATCTCCAACTCTCTCAGAGATGTTGTCCCTCTCGGAAATGGCAAATACACCATGGGAAATGAGTTGTGGTATGGACCGGACCGAGTGAAATACTTGGGTCCCTTTTCAGCTCAAACCCCTTCATACTTGACTGGGGAATTCCCTGGAGATTATGGATGGGACACCGCAGGCTTATCTGCTGATCCTGAAGCATTTGCTAGGAACAGAGCTCTTGAGGTGATTCATGGGCGATGGGCGATGCTTGGAGCACTAGGGTGCATCACACCAGAAGTTCTAGAGAAATGGCTGCGAGTGGACTTCAAGGAGCCAGTGTGGTTCAAAGCAGGAGCTCAGATTTTCTCAGAAGGAGGCCTTGACTACTTAGGCAACCCCAACCTGGTTCACGCCCAGAGCATCCTGGCCGTCCTTGGCTTCCAAGTGGTCCTCATGGGCCTGGTCGAAGGCTTCCGTATCAACGGCCTTCCGGGCGTCGGAGAAGGCAACGACCTCTACCCCGGAGGCCAGTACTTCGACCCTCTCGGCCTCGCCGACGACCCCGTCACTTTCGCTGAGCTCAAGGTCAAGGAAATCAAGAATGGAAGGTTGGCCATGTTCTCCATGTTTGGCTTCTTTGTTCAAGCCATTGTTACTGGAAAAGGACCGTTGGAGAATCTGTTGGATCACCTTGATAACCCTGTGGCTAATAATGCTTGGGTCTATGCCACCAAGTTCGTGCCTGGCTCTTAA 810 0.5222 MASTFMAASASSSTVLKPSPFLGQTRSSISNSLRDVVPLGNGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1134 269 SUPERFAMILY Chlorophyll a-b binding protein 50 266 - -
Prci6g1134 269 Gene3D Chlorophyll a/b binding protein domain 58 262 - -
Prci6g1134 269 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 7 268 IPR001344 GO:0009765|GO:0016020
Prci6g1134 269 FunFam Chlorophyll a-b binding protein, chloroplastic 58 262 - -
Prci6g1134 269 Pfam Chlorophyll A-B binding protein 68 235 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1134 Prci-Chr6 7985321 7986758 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1134 12 268 Chloroplast and Mitochondria Gene Families AT2G05070 69.549 1.15e-124 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1134 K08914 - vvi:100260599 526.554