Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1133 ATGGCATCCACGTTCATGGCAGCCTCAGCAAGCTCTAGCACTGTTCTTAAACCTTCCCCTTTTCTGGGTCAAACCAGATCATCCATCTCCAACTCTCTCAGAGATGTTGTCCCTCTCGGAAATGGCAAATACACCATGCAGGGAAATGAGTTGTGGTATGGACCGGACCGAGTGAAATACTTGGGTCCCTTTTCAGCTCAAACCCCTTCATACTTGACTGGGGAATTCCCTGGAGATTATGGATGGGACACCGCAGGCTTATCTGCTGATCCTGAAGCATTTGCTAGGAACAGAGCTCTTGAGGTGATTCATGGGCGATGGGCGATGCTTGGAGCACTAGGGTGCATCACACCAGAAGTTCTAGAGAAATGGCTGCGAGTGGACTTCAAGGAGCCAGTGTGGTTCAAAGCAGGAGCTCAGATTTTCTCAGAAGGAGGCCTTGACTACTTAGGCAACCCCAACCTGGTTCACGCCCAGAGCATCCTGGCCGTCCTTGGCTTCCAAGTGGTCCTCATGGGCCTGGTCGAAGGCTTCCGTATCAACGGCCTTCCGGGCGTCGGAGAAGGCAACGACCTCTACCCCGGAGGCCAGTACTTCGACCCTCTCGGCCTCGCCGACGACCCCGTCACTTTCGCTGAGCTCAAGGTCAAGGAAATCAAGAATGGAAGGTTGGCCATGTTCTCCATGTTTGGCTTCTTTGTTCAAGCCATTGTTACTGGAAAAGGACCGTTGGAGAATCTGTTGGATCACCTTGATAACCCTGTGGCTAATAATGCTTGGGTCTATGCCACCAAGTTCGTGCCTGGCTCTTAA 813 0.5228 MASTFMAASASSSTVLKPSPFLGQTRSSISNSLRDVVPLGNGKYTMQGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1133 270 SUPERFAMILY Chlorophyll a-b binding protein 51 267 - -
Prci6g1133 270 FunFam Chlorophyll a-b binding protein, chloroplastic 59 263 - -
Prci6g1133 270 Gene3D Chlorophyll a/b binding protein domain 59 263 - -
Prci6g1133 270 Pfam Chlorophyll A-B binding protein 69 236 IPR022796 -
Prci6g1133 270 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 7 269 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1133 Prci-Chr6 7985315 7986758 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1133 12 269 Chloroplast and Mitochondria Gene Families AT2G05070 69.549 5.05e-125 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1133 K08914 - vvi:100260599 521.931