Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1114 ATGGAGGATTGTGCGTTGTGCGGGAAGACGGCGAGGATGTACTGTGAGTCGGACCAGGCAAAGCTTTGCTGGGACTGCGACAACAAGGTGCACGGCGCCAACTTCCTGGTGGCGAAGCACACCAGGATCCTCCTATGCCGTACCTGCCAGTCTTTCACTCCATGGAAAGCCTGTGGTCCCAAGCTCACGCCGACTCGCTCCCTCTGCCACCACTGCGCCACCGATTCCCACAGGGATCAACAAGATGATGCTGATCATCATGATGTCCGTGATAATCCTGATCACGATGAGGAGGAAGATGTCGGAGATTCTAGTTCCGATGCTGACTCTGGTTATGAAGATGACGACGAAGACACCGGAGAAGAGGAGGAGGAGGAGGAGGAGGAAGGAGAGAACCAGGTGGTTCCATGGTGTTGCGCCTCCACTTCGGTGTCATCGCCGCCTCTTGCGAGTTCTGCTTCAGCTGGTTCTGGTTTAGCTTCGAATCGGCGGCGAGGGAGTTCGTTTGTCCATTCTGATGATGAGATCGGTTGTTCTTCATCTGAAATGCCCTCTGCTACGCAACTACAAGACGATGATTCATCGTCTTGGAGCATCCTCAGGCCATGGAAGCAGCCGAGAACTACTCAGCATAGCCAATAA 642 0.5421 MEDCALCGKTARMYCESDQAKLCWDCDNKVHGANFLVAKHTRILLCRTCQSFTPWKACGPKLTPTRSLCHHCATDSHRDQQDDADHHDVRDNPDHDEEEDVGDSSSDADSGYEDDDEDTGEEEEEEEEEGENQVVPWCCASTSVSSPPLASSASAGSGLASNRRRGSSFVHSDDEIGCSSSEMPSATQLQDDDSSSWSILRPWKQPRTTQHSQ 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1114 213 MobiDBLite consensus disorder prediction 136 166 - -
Prci6g1114 213 MobiDBLite consensus disorder prediction 95 132 - -
Prci6g1114 213 MobiDBLite consensus disorder prediction 76 94 - -
Prci6g1114 213 SMART bboxneu5 1 45 IPR000315 GO:0008270
Prci6g1114 213 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 206 - -
Prci6g1114 213 MobiDBLite consensus disorder prediction 173 213 - -
Prci6g1114 213 CDD Bbox1_BBX-like 4 45 - -
Prci6g1114 213 Pfam B-box zinc finger 3 44 IPR000315 GO:0008270
Prci6g1114 213 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Prci6g1114 213 MobiDBLite consensus disorder prediction 76 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1114 Prci-Chr6 7805789 7806852 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1114 2 182 C2C2-CO-like Transcription Factor Family AT4G27310 40.476 6.87e-34 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci6g1114 zf-B_box 3.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1114 - - pcin:129314210 333.954