Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1107 ATGCTTCTGGTTTCCTTATTACTGTGGCAACGTCAAGGATATGTATCTTTAACTTGTGAAACCCATTTCATTTTAGCAATGGCCATTCTTCCTTATCTGCTTGCTCTTACAAATCTGTTCATGTTCTATAGCCGATTTTCTTATGCAACTGACACTCTTACCCAATTTCAGTCACTTCCTGATGGTAGGACCTTGGTTTCGAGAGATGGAAGCTTTGAACTAGGTTTCTTTAGCCCAGGTAGTTCCAGAAATCGATATCTTGGAATTTGGTACAAAAACATCCCAGTTAGAACTGTTGTTTGGGTTGCCAACCGTGACAAACCAATCAAAGACAACTCTAGCATGTTGAGCATAAACACAGAGGGACACATCGTGATTCTCGGCCAGAATCATACTGTTGTTTGGTTGGCAAATTCAAGAACAAAGGCCTTGAGTCCAATTGTCCAACTTTTAGGCTCTGGAAACTTGGTATTAAAAGATAAGAAAGACCAGAATCCTCAAAACTACTTGTGGCAGAGCTTTGACTATCCTTCTGATACACTTTTGCCAGGAATGAAGTTTGGATGGGACTTGAGAACTGGTCTTAATCGACGAATAATAGGATGGAAGAGCTCAGACGACCCTTCTCCTGGAGACTTCATATGGGAGCTTGTAAATCATAATAACCCTGAGGGAGTTTTATGGAAGGGCCAAACAAAGTATTTCCGGAGTGGTCCTTGGAATGGTCTTCGATTTAGTGGAGCTCCTGAGTTGAGGAACAATCTGGTTTTTGATTTCAAATTTGTATCCAATAAGGATGAGGTCTATTACATGTACAACTTGAGGGATGATTCAGTAATTTCAAGAATTGTTATGAATCAAACAATATATGTACGTCAGCGTCTCACGTGGATTGATGAAGCTAAAAGTTGGAGGCTTTTTGCTTCTGTGCCAAGAGATGATTGTGATCGGTATAATCTATGCGGTCCATTTGGAAATTGCGTCATGGGTGAGTCACCAGTATGCCAGTGCTTGCAAGGATTCAAGCCAAAATCATCCCAGAACTGGGATGCAATGGATTGGACTCAAGGATGTATCCGCAGTGAACCATGGAGATGCAAGGTAAAGAACAGAGATAATTTTCTTAAATTCAGTGCACTCAAATTGCCAGATGCCTCACAGTCTTGGGTTGATGGAAGTATGACACTTGAGGAGTGCAAAGCCAAGTGCTTGGAAAATTGTTCCTGTACTGCTTATGCTAACTCAGATATCAGCAGAGGGGGTAGTGGCTGCATCATCTGGTTTGGTGATCTAAATGATATAAGACAGATTTCAGCTGCTGGGCAAGATCTATATATTCGGTTGGCTGCTCCTGAAATAGCTGACCGTGAAGACGCAGATGGAAAGAAGATAAAGGTGATTATATTACCAGTTGCCAGTTTCTTGGCTCTTGTGATGTTTCTCACTTTATTTTACACTTACAAGAACCGAAGACGGTCTGAAGTGGAAATAGAGAAAACCTTGCCAACAGAAAATAATGATGAAGGCCCAGAAGAAGATATGGAACTTCCTTTCTATGACTTGTCTGTAATAGCCTGTGCTACTAATGACTTCTCAACTAACAATAAGCTTGGGGAAGGTGGTTTTGGGCCTGTATATAAGGGTGTAGTGGCAAATGGACAAGAGATTGCCGTCAAGCGGCTTTCACAAAGATCTGGACAAGGATTGGAAGAATTTAAGAATGAAGTTGTTTTGTGTGCCAAACTTCAGCACCGTAACCTTGTTAAGGTTCTTGGTTGTTGCATTCAAGGAGAGGAGAAGATGCTCATCTATGAATACATGTCCAACAAGAGTTTAGATTCATTTATTTTTGGTTCTACTACTCAAAGTAAATTGCTAGATTGGCCTAAGCGCTATAACATTATACTTGGAATAGCTCGGGGGCTTCTTTATCTTCATCAAGATTCTAGATTGAGGATTATCCATAGAGACCTTAAAGCCAGTAATGTATTATTGGACAATGAGTTGAATCCAAAAATTTCTGATTTTGGCATGGCAAGAATCTTTGGAGGAGATCAAGTCGAGGGAAACACAAGGAGAGTGGTTGGTACATATGGGTATATGGCACCTGAATATGCCTTTGATGGGTTATTTTCCGTCAAATCCGATGTGTTCAGCTTTGGCATATTAGTATTGGAGATAGTAAGTGGAATGAAAATCAGAGGGCTGTCTTTGCCAAGCAAGAATATTAATCTTGTGGGGCATGCATGGAGGTTGTGGAAGGAGGACATTCCACTGGAATTGATTGATGCATGCTTGATGGACTTTGTTGTTGAATCAGAAGCATTGCGGTGCATCAATACTGGCCTTCTTTGTGTGCAACACCATCCTGATGATAGGCCAGACATGGCATCGGTTGTAGTGATGTTGAGCAGTGAGATTGCTTTACCTCAACCTAAAGAGCCTGGTTTCCTAATGGAGAAAACCTCAGTTAAAGGAAGTTCCTCATCTGGCGATCATTTGACTTGTTCCACCAATGGAATATCTATTACCCAGTTAGAGGCCAGATAG 2550 0.4118 MLLVSLLLWQRQGYVSLTCETHFILAMAILPYLLALTNLFMFYSRFSYATDTLTQFQSLPDGRTLVSRDGSFELGFFSPGSSRNRYLGIWYKNIPVRTVVWVANRDKPIKDNSSMLSINTEGHIVILGQNHTVVWLANSRTKALSPIVQLLGSGNLVLKDKKDQNPQNYLWQSFDYPSDTLLPGMKFGWDLRTGLNRRIIGWKSSDDPSPGDFIWELVNHNNPEGVLWKGQTKYFRSGPWNGLRFSGAPELRNNLVFDFKFVSNKDEVYYMYNLRDDSVISRIVMNQTIYVRQRLTWIDEAKSWRLFASVPRDDCDRYNLCGPFGNCVMGESPVCQCLQGFKPKSSQNWDAMDWTQGCIRSEPWRCKVKNRDNFLKFSALKLPDASQSWVDGSMTLEECKAKCLENCSCTAYANSDISRGGSGCIIWFGDLNDIRQISAAGQDLYIRLAAPEIADREDADGKKIKVIILPVASFLALVMFLTLFYTYKNRRRSEVEIEKTLPTENNDEGPEEDMELPFYDLSVIACATNDFSTNNKLGEGGFGPVYKGVVANGQEIAVKRLSQRSGQGLEEFKNEVVLCAKLQHRNLVKVLGCCIQGEEKMLIYEYMSNKSLDSFIFGSTTQSKLLDWPKRYNIILGIARGLLYLHQDSRLRIIHRDLKASNVLLDNELNPKISDFGMARIFGGDQVEGNTRRVVGTYGYMAPEYAFDGLFSVKSDVFSFGILVLEIVSGMKIRGLSLPSKNINLVGHAWRLWKEDIPLELIDACLMDFVVESEALRCINTGLLCVQHHPDDRPDMASVVVMLSSEIALPQPKEPGFLMEKTSVKGSSSSGDHLTCSTNGISITQLEAR 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1107 849 Pfam PAN-like domain 366 434 IPR003609 -
Prci6g1107 849 Pfam Domain of unknown function (DUF3403) 804 849 IPR021820 GO:0004674
Prci6g1107 849 PIRSF SRK 21 849 IPR024171 GO:0004674
Prci6g1107 849 CDD B_lectin 57 177 IPR001480 -
Prci6g1107 849 SUPERFAMILY alpha-D-mannose-specific plant lectins 99 208 IPR036426 -
Prci6g1107 849 Gene3D Phosphorylase Kinase; domain 1 505 606 - -
Prci6g1107 849 Gene3D Hepatocyte Growth Factor 365 445 - -
Prci6g1107 849 SMART blect_4 56 177 IPR001480 -
Prci6g1107 849 SMART ntp_6 369 448 IPR003609 -
Prci6g1107 849 Pfam D-mannose binding lectin 98 203 IPR001480 -
Prci6g1107 849 ProSiteProfiles Protein kinase domain profile. 531 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1107 849 SUPERFAMILY Protein kinase-like (PK-like) 513 810 IPR011009 -
Prci6g1107 849 CDD STKc_IRAK 537 803 - -
Prci6g1107 849 CDD PAN_AP_plant 369 449 - -
Prci6g1107 849 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 46 174 - -
Prci6g1107 849 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 365 448 - -
Prci6g1107 849 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 39 793 - -
Prci6g1107 849 Pfam Protein tyrosine and serine/threonine kinase 533 732 IPR001245 GO:0004672|GO:0006468
Prci6g1107 849 SMART serkin_6 531 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1107 849 Gene3D - 44 174 IPR036426 -
Prci6g1107 849 Pfam S-locus glycoprotein domain 235 345 IPR000858 GO:0048544
Prci6g1107 849 Gene3D Transferase(Phosphotransferase) domain 1 607 811 - -
Prci6g1107 849 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 607 811 - -
Prci6g1107 849 ProSiteProfiles Bulb-type lectin domain profile. 50 171 IPR001480 -
Prci6g1107 849 ProSitePatterns Serine/Threonine protein kinases active-site signature. 653 665 IPR008271 GO:0004672|GO:0006468
Prci6g1107 849 ProSiteProfiles EGF-like domain profile. 311 347 IPR000742 -
Prci6g1107 849 ProSiteProfiles PAN/Apple domain profile. 366 449 IPR003609 -
Prci6g1107 849 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 495 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1107 Prci-Chr6 7746549 7751320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1107 451 825 Receptor kinase-like Gene Family AT4G23190 50.656 8.31e-123 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci6g1107 PK_Tyr_Ser-Thr 2.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1107 - - gmx:100786696 1055.82