Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1106 ATGAAGCTTGGATGGGACCAGAGGACTGGTCTAAACCGGCATCTAATAGCATGGAAGAACTGGGATGACCCTTCTCCGGGAGATTTCACATGTGAACTCATGCTTCACAATTTCCCAGAAATAGTTACTTGGCAAGGTCGAACAGAATTTTACAGGAGTGGCCCTTGGAATGGTGATCACTTTGTTGATACTCCTTCATCAATGAAGATTTTACTTTATAATGCAACGTTTGTCTCCAACAAGGATGAGGTGTACTACATGTACAAACCCTTAAATGAGTCAATGACTTCTATCAGAGTCTTGAACCAAACAAGAAACTCTCTGCAAAATCTCATGTGGATTGAAGAGGATCAAAGCTGGAAATCTTTTGGTGATGTTCCAAGAGATAATTGTGGAAGATATAATCTTTGTGGTGCTTATGGAATCTGTGCTATTGCTGACTCAACGTTATGCCAATGCTTGAGAGGATTTGAGCCAAAATCTCCCAAAAATTGGGACGTCTATGACTGGACAGGAGGGTGTGTTCGCAGTGAACCTTGGAGTTGTAAGGTGAAAGGAAAAGACAATTTTCTTAAATATAATAACCTTAAATTACCAGATACTACACATACGTGGGTCAATTCAAGTATGACACTTGAGGAATGCAAAGTCAAATGTTGGGAAAATTGTTCTTGTACTGCTTATGCTAATTCAGATATTAGAGAAGGAGGTAGTGGCTGTGCCATGTGGTTTGGTGATCTACTTGACTTGAATCAAATGTCAAATGATGCTGGTCAAGATATATATATTCGCCTTGCTTCTACAGATCATATAGCTAGCCATGAAGGTAGTGCTAATACGTACAAGATAAAGGTATCTTTGATAACAGCTTTTGTTTTAGCACTTGGGATGCTTTTAACCTTCCTCTATATATATAAGAGCAGAAGAAAGTCTAAAAAAAATACTGATGAAGTCCCAGAAGCAGATATGGAGCTTCCTCTCTATGACTTTGCTATAATAGCTAGTGCTACACACAATTTCTCAGATGACAGTAAGCTTGGCCAAGGTGGTTTTGGACTGGTATATAAGGGTACATTAGCTGATGGTCAAGAAATTGCTGTGAAGAGACTTTCACAGAATTCTCACCAAGGAATGAAAGAATTCAGAAATGAAGTTATGTTGTGTGCCAAACTTCAGCATCGGAATCTTGTCAAAGTTCTTGGTTGTTGTATTCAAGGAGAGGAGAGAATGCTCGTTTATGAATACATGCCTAATAAGAGTTTAGATTCATTTATTTTTGGTTCTCCTATCCAAAGGAAAGGCTTAGATTGGTCCAAGCGTTTCCATATTATATGTGGAATTGCTCGAGGACTTATGTATCTTCATCAAGATTCTAGATTACGAATCATTCATAGAGATTTGAAAACAAGTAATATATTACTAGACAATGAATTAAATCCAAAAATATCAGATTTTGGTTTGGCAAAAACATTTGGAAAAGATGAAAATCAAGAAAATACAAGGAGAGTTATTGGCACATATGGTTATATGGCACCTGAATATGCGATCTATGGATTATTCTCCATGAAATCTGATGTGTTCAGCTTTGGAATTTTACTACTTGAAATAGTGAGTGGGATGAAAATTGGAGCATTCTCGTTGTCAAAGCAGAGTGTTAACCTTATTGGGCATGCTTGGAGGTTGTGGAAGGAGGGAATCCCACTTGAATTGATTGATTCCCATTTCGAAGAATCTTGTATTGAATCAGAAGTACTACGGTGCATCCATGTCGGTCTTCTTTGTATGCAAAACCATCCTGATGATAGGCCAAACATGACATCTGTGGTTGTAATGTTAAACAGCGAAGTTGACTTGCCTCCGCCTAAAGAGCCTGGTTTCCTCTTAGAAACGATTCCAGTCAGAAGAGGATCTTTTCTTGGCAATCATACTACAGTTTCAATAAACGAAATTTCTATCACCCAGTTAGATCCTAGATGA 1977 0.3809 MKLGWDQRTGLNRHLIAWKNWDDPSPGDFTCELMLHNFPEIVTWQGRTEFYRSGPWNGDHFVDTPSSMKILLYNATFVSNKDEVYYMYKPLNESMTSIRVLNQTRNSLQNLMWIEEDQSWKSFGDVPRDNCGRYNLCGAYGICAIADSTLCQCLRGFEPKSPKNWDVYDWTGGCVRSEPWSCKVKGKDNFLKYNNLKLPDTTHTWVNSSMTLEECKVKCWENCSCTAYANSDIREGGSGCAMWFGDLLDLNQMSNDAGQDIYIRLASTDHIASHEGSANTYKIKVSLITAFVLALGMLLTFLYIYKSRRKSKKNTDEVPEADMELPLYDFAIIASATHNFSDDSKLGQGGFGLVYKGTLADGQEIAVKRLSQNSHQGMKEFRNEVMLCAKLQHRNLVKVLGCCIQGEERMLVYEYMPNKSLDSFIFGSPIQRKGLDWSKRFHIICGIARGLMYLHQDSRLRIIHRDLKTSNILLDNELNPKISDFGLAKTFGKDENQENTRRVIGTYGYMAPEYAIYGLFSMKSDVFSFGILLLEIVSGMKIGAFSLSKQSVNLIGHAWRLWKEGIPLELIDSHFEESCIESEVLRCIHVGLLCMQNHPDDRPNMTSVVVMLNSEVDLPPPKEPGFLLETIPVRRGSFLGNHTTVSINEISITQLDPR 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1106 658 ProSiteProfiles Protein kinase domain profile. 340 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1106 658 CDD STKc_IRAK 346 613 - -
Prci6g1106 658 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 305 415 - -
Prci6g1106 658 CDD PAN_AP_plant 181 266 - -
Prci6g1106 658 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Prci6g1106 658 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 416 620 - -
Prci6g1106 658 SMART serkin_6 340 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1106 658 ProSiteProfiles PAN/Apple domain profile. 182 266 IPR003609 -
Prci6g1106 658 Gene3D Phosphorylase Kinase; domain 1 302 415 - -
Prci6g1106 658 Gene3D Hepatocyte Growth Factor 181 268 - -
Prci6g1106 658 Pfam Protein tyrosine and serine/threonine kinase 344 610 IPR001245 GO:0004672|GO:0006468
Prci6g1106 658 SUPERFAMILY Protein kinase-like (PK-like) 323 621 IPR011009 -
Prci6g1106 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Prci6g1106 658 Pfam PAN-like domain 182 250 IPR003609 -
Prci6g1106 658 Pfam Domain of unknown function (DUF3403) 614 658 IPR021820 GO:0004674
Prci6g1106 658 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 98 627 - -
Prci6g1106 658 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 181 265 - -
Prci6g1106 658 Gene3D Transferase(Phosphotransferase) domain 1 416 618 - -
Prci6g1106 658 SMART ntp_6 185 265 IPR003609 -
Prci6g1106 658 Pfam S-locus glycoprotein domain 51 161 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1106 Prci-Chr6 7725441 7728638 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1106 301 658 Receptor kinase-like Gene Family AT4G23150 51.499 7.82e-130 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci6g1106 PK_Tyr_Ser-Thr 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1106 - - pcin:129322539 833.943