Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1105 ATGTATATATGTACTTTGCCAGCTCTTTCGATAGCATTAATGGCAATCATTCCTTGCGTGCCAGTTCTATTTTTCAATATGCTTTTATTCTTCTCTGCATTGGCCAGTGCAACCGATATTATTACACATTCTCAGCCACTTGTTGATGATGGGAAATCCACCTTGGTGTCTGGAGATGGAAGATTTGAACTGGGATTTTTCAGCCCAGGTAGTTCCACAAACCGCTATGTTGGACTTTGGTACAAAAACATCCCAGTAACTGTTCTCTGGGTCGCCAACCGTGAGAAACCAGTCAAAGACAAGCTTGGCATGTTGAGAATAAACAAAGAGGGACATCTTGAACTTGTCAGCCACAATGAGACTCTTGTTTGGGTGGCAAACTCAACCACAAAGGCCTTGGATAATCCAATCGTGCAGCTTTTAGGCTCTGGAAACTTGGTACTAAGAGACGAGAAAGACCAAAATCCACAAAACTACTTGTGGCAAAGTTTTGATTATCTCTCTAATGTTTTTTTGCCAGGAATGAAGCTTGGATGGGACCAGAGGACTGGTCTAAACCGGCATCTAATAGCATGGAAGAACTGGGATGACCCTTCTCCGGGAGATTTCACATGTGAACTCATGCTTCACAATTTCCCAGAAATAGTTACTTGGCAAGGTCGAACAGAATTTTACAGGAGTGGCCCTTGGAATGGTGATCACTTTGTTGATACTCCTTCATCAATGAAGATTTTACTTTATAATGCAACGTTTGTCTCCAACAAGGATGAGGTGTACTACATGTACAAACCCTTAAATGAGTCAATGACTTCTATCAGAGTCTTGAACCAAACAAGAAACTCTCTGCAAAATCTCATGTGGATTGAAGAGGATCAAAGCTGGAAATCTTTTGGTGATGTTCCAAGAGATAATTGTGGAAGATATAATCTTTGTGGTGCTTATGGAATCTGTGCTATTGCTGACTCAACGTTATGCCAATGCTTGAGAGGATTTGAGCCAAAATCTCCCAAAAATTGGGACGTCTATGACTGGACAGGAGGGTGTGTTCGCAGTGAACCTTGGAGTTGTAAGGTGAAAGGAAAAGACAATTTTCTTAAATATAATAACCTTAAATTACCAGATACTACACATACGTGGGTCAATTCAAGTATGACACTTGAGGAATGCAAAGTCAAATGTTGGGAAAATTGTTCTTGTACTGCTTATGCTAATTCAGATATTAGAGAAGGAGGTAGTGGCTGTGCCATGTGGTTTGGTGATCTACTTGACTTGAATCAAATGTCAAATGATGCTGGTCAAGATATATATATTCGCCTTGCTTCTACAGATCATATAGCTAGCCATGAAGGTAGTGCTAATACGTACAAGATAAAGGTATCTTTGATAACAGCTTTTGTTTTAGCACTTGGGATGCTTTTAACCTTCCTCTATATATATAAGAGCAGAAGAAAGTCTAAAAAAAATACTGATGAAGTCCCAGAAGCAGATATGGAGCTTCCTCTCTATGACTTTGCTATAATAGCTAGTGCTACACACAATTTCTCAGATGACAGTAAGCTTGGCCAAGGTGGTTTTGGACTGGTATATAAGGGTACATTAGCTGATGGTCAAGAAATTGCTGTGAAGAGACTTTCACAGAATTCTCACCAAGGAATGAAAGAATTCAGAAATGAAGTTATGTTGTGTGCCAAACTTCAGCATCGGAATCTTGTCAAAGTTCTTGGTTGTTGTATTCAAGGAGAGGAGAGAATGCTCGTTTATGAATACATGCCTAATAAGAGTTTAGATTCATTTATTTTTGGTTCTCCTATCCAAAGGAAAGGCTTAGATTGGTCCAAGCGTTTCCATATTATATGTGGAATTGCTCGAGGACTTATGTATCTTCATCAAGATTCTAGATTACGAATCATTCATAGAGATTTGAAAACAAGTAATATATTACTAGACAATGAATTAAATCCAAAAATATCAGATTTTGGTTTGGCAAAAACATTTGGAAAAGATGAAAATCAAGAAAATACAAGGAGAGTTATTGGCACATATGGTTATATGGCACCTGAATATGCGATCTATGGATTATTCTCCATGAAATCTGATGTGTTCAGCTTTGGAATTTTACTACTTGAAATAGTGAGTGGGATGAAAATTGGAGCATTCTCGTTGTCAAAGCAGAGTGTTAACCTTATTGGGCATGCTTGGAGGTTGTGGAAGGAGGGAATCCCACTTGAATTGATTGATTCCCATTTCGAAGAATCTTGTATTGAATCAGAAGTACTACGGTGCATCCATGTCGGTCTTCTTTGTATGCAAAACCATCCTGATGATAGGCCAAACATGACATCTGTGGTTGTAATGTTAAACAGCGAAGTTGACTTGCCTCCGCCTAAAGAGCCTGGTTTCCTCTTAGAAACGATTCCAGTCAGAAGAGGATCTTTTCTTGGCAATCATACTACAGTTTCAATAAACGAAATTTCTATCACCCAGTTAGATCCTAGATGA 2499 0.3886 MYICTLPALSIALMAIIPCVPVLFFNMLLFFSALASATDIITHSQPLVDDGKSTLVSGDGRFELGFFSPGSSTNRYVGLWYKNIPVTVLWVANREKPVKDKLGMLRINKEGHLELVSHNETLVWVANSTTKALDNPIVQLLGSGNLVLRDEKDQNPQNYLWQSFDYLSNVFLPGMKLGWDQRTGLNRHLIAWKNWDDPSPGDFTCELMLHNFPEIVTWQGRTEFYRSGPWNGDHFVDTPSSMKILLYNATFVSNKDEVYYMYKPLNESMTSIRVLNQTRNSLQNLMWIEEDQSWKSFGDVPRDNCGRYNLCGAYGICAIADSTLCQCLRGFEPKSPKNWDVYDWTGGCVRSEPWSCKVKGKDNFLKYNNLKLPDTTHTWVNSSMTLEECKVKCWENCSCTAYANSDIREGGSGCAMWFGDLLDLNQMSNDAGQDIYIRLASTDHIASHEGSANTYKIKVSLITAFVLALGMLLTFLYIYKSRRKSKKNTDEVPEADMELPLYDFAIIASATHNFSDDSKLGQGGFGLVYKGTLADGQEIAVKRLSQNSHQGMKEFRNEVMLCAKLQHRNLVKVLGCCIQGEERMLVYEYMPNKSLDSFIFGSPIQRKGLDWSKRFHIICGIARGLMYLHQDSRLRIIHRDLKTSNILLDNELNPKISDFGLAKTFGKDENQENTRRVIGTYGYMAPEYAIYGLFSMKSDVFSFGILLLEIVSGMKIGAFSLSKQSVNLIGHAWRLWKEGIPLELIDSHFEESCIESEVLRCIHVGLLCMQNHPDDRPNMTSVVVMLNSEVDLPPPKEPGFLLETIPVRRGSFLGNHTTVSINEISITQLDPR 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1105 832 Pfam S-locus glycoprotein domain 225 335 IPR000858 GO:0048544
Prci6g1105 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 34 164 - -
Prci6g1105 832 Gene3D Transferase(Phosphotransferase) domain 1 590 792 - -
Prci6g1105 832 Gene3D Hepatocyte Growth Factor 355 442 - -
Prci6g1105 832 Gene3D Phosphorylase Kinase; domain 1 476 589 - -
Prci6g1105 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 355 439 - -
Prci6g1105 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 590 794 - -
Prci6g1105 832 Gene3D - 32 164 IPR036426 -
Prci6g1105 832 ProSiteProfiles Bulb-type lectin domain profile. 38 161 IPR001480 -
Prci6g1105 832 SMART ntp_6 359 439 IPR003609 -
Prci6g1105 832 ProSitePatterns Protein kinases ATP-binding region signature. 520 542 IPR017441 GO:0005524
Prci6g1105 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Prci6g1105 832 Pfam D-mannose binding lectin 87 193 IPR001480 -
Prci6g1105 832 ProSiteProfiles Protein kinase domain profile. 514 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1105 832 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 25 777 - -
Prci6g1105 832 CDD B_lectin 44 166 IPR001480 -
Prci6g1105 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 479 589 - -
Prci6g1105 832 PIRSF SRK 10 832 IPR024171 GO:0004674
Prci6g1105 832 SMART blect_4 46 167 IPR001480 -
Prci6g1105 832 Pfam PAN-like domain 356 424 IPR003609 -
Prci6g1105 832 ProSiteProfiles PAN/Apple domain profile. 356 440 IPR003609 -
Prci6g1105 832 Pfam Domain of unknown function (DUF3403) 788 832 IPR021820 GO:0004674
Prci6g1105 832 SUPERFAMILY alpha-D-mannose-specific plant lectins 88 198 IPR036426 -
Prci6g1105 832 CDD PAN_AP_plant 355 440 - -
Prci6g1105 832 CDD STKc_IRAK 520 787 - -
Prci6g1105 832 SUPERFAMILY Protein kinase-like (PK-like) 497 795 IPR011009 -
Prci6g1105 832 Pfam Protein tyrosine and serine/threonine kinase 518 784 IPR001245 GO:0004672|GO:0006468
Prci6g1105 832 SMART serkin_6 514 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1105 Prci-Chr6 7725441 7730248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1105 475 832 Receptor kinase-like Gene Family AT4G23150 51.499 7.11e-128 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci6g1105 PK_Tyr_Ser-Thr 3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1105 - - gmx:100786696 958.362