Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1101 ATGGCTATTCTTCCTTATGTGCCTGTTCTTCCATATCTGCTTTTCTTCTTCTCCGGATTTTCTTTTGCAACTGATACCATTACTCGCTTTGAGTCTTTTTCTGATGGCAAGACCTTGGTTTCTAAAAACGGAATATTTGAATTAGGTTTCTTCAGCCCAGGGAGTTCCACAGACCGCTATGTTGGAATCTGGTACCACAAGATCCCGGAGAGAACTGTTGTTTGGGTTGCTAACCGTGATAGACCCATCAAAAACAACTTTGGCATGTTGAGCATAAACAGAGAGGGACATCTACTTCTCAGCCATAATAAGACTATTGTTTGGCTGGCAAATTCCACCACAAGGGCCTTGAGTCCGATTGTGCAGCTTTTGAGCTCTGGAAACTTGGTGCTAAGAGATGGGGAAGATCAAAAGCCCCAAAACTACTTGTGGCAAAGCTTCGACTATCCTTCTGATACGATTTTGCCAGGAATGAAGTTTGGATGGGACCTGAGAACTGGGCTTAATCGACGTTATACAGCATGGAAGAATTGGGATGACCCTTCTTTTGGAGACTTTACAGCAGAGCTTGTACTACACTGTTATCCTGATTTAGTAAACTGGCAAGGCCCAACAGAGTATGTAAGGAGTGGCCCCTGGAATGGTGTTCGGTTCAGTGGCATCTCTTATGCGACGAGCAATCCACTTTATGAAGCAAGGTTTGTATGGAATAAAGATGAGATTTATTCAGTGCATAATGTCATAAATGAGTCACTGATTACTAGATTTGTCTACAACCAAACATTATACTCACTACTGGATACAATATGGAGTGAAGATGATCAAAGGTGGATTACATTTAGTTTTGCACCAATTGATAATTGTGATAGATATAATCGTTGCGGCCCAAATGGAAACTGTGTCTTGGGGGACACACCAATATGCCAGTGCTTAACCGGATTCTTGCCAAAATCACCAGAAAATTGGAAGGCAATGAATTGGGCTGAAGGATGTGTCCGCAATAGATCATGGAGTTGCAAGGAAAAAAATAGGGATTATTTTGTCAAATTTGGTAGGCTGAAATTGCCAGATACTACATATACTTGGGTGAATAAGAGTATGACACTTGAGGAATGCAAAGCCAAATGCTGGGAAAATTGTTCTTGTAATGCTTATGCTAATTCAAATATCAAGGAAGGAGGTAGTGGTTGTGCTATGTGGTTCGGTGATTTAATTGATATAAGGCAGATTCCCTTTGATGATCAAGATTTATATATTCGTCTAGCTTCTCCAGAAACAGCGAAACATGATGAAGCTAATGGAAATAAGACAAAAGTGATTGTTGTAACAGCAACCACTGTATTGGCTGTTGTGATGCTTTTGGCTCTGTTTTGCATTTACAAGTGCAGAAGAAACTCTATAGCAAACAAGAAGGAAGGTTCTGAAGGAAATATGGAGCTAAAAACCTTGTTGGCAGTAAACAATGAAGAAGGCTATGAAGGAAATATGGAGCTACATATCTATGACCTAGCAGTAATAGCTAACGCTACTAATAACTTCTCATCTGACAACAAGCTTGGCCAAGGTGGCTTTGGGCCAGTATACAGGGGTATGCTTGCAGACGGACAAGAAATTGCGGTGAAACGGCTTTCACAAAGTTCTTACCAAGGGTTGTGTGAATTTAAGAATGAAGTCAAATTGTGTGCCAAACTTCAGCATCGTAATCTTGTTAAGGTCCTTGGTTGTTGCGTTCAAGGAGAAGAAAAAATGCTAATATATGAATACATGCCCAACAAGAGCTTAGATTCATTTATTTTTGGTTCTGAAAGTAAATTTCTAAATTGGTCCAAGCGCTTTCACATTATTTGTGGAATTGCTCGAGGGCTTGTATATCTTCATCAAGATTCTAGATTAAGAATCGTCCATAGAGACCTTAAAGCAAGTAATATATTATTGGATAGTGAATTAAATCCAAAAATCTCAGATTTTGGCTTGGCAAGAATATTTGGAGGGGATCAAATTGAAGATAATACAAGGCAAATAGTTGGTACATATGGTTATATGGCTCCTGAATATGCAATTCATGGACTGTTCTCTATCAAATCTGACGTATTCAGCTTTGGAGTATTACTGTTGGAAATAGTGAGTGGCATGAAAAATAGGGGCCCTTTCTTGCCAAGCCAAAGCGTTAATCTTATTGGACATGCATGGAGGTTGTGGAATGAGGGAATCCCACTAAAATTCGCTGATGAACATTTGGGGAACTCTTGCACTGAATCAAAAGTATTACGGTGCATTCACATTGGTCTTCTTTGTTTGCAATGCCATGCTAATGATAGGCCAGACATGACATCTGTGGTTATAATGTTGAGTAGTGAGAGTGTCTTGCCCCAACCTAAAGAACCAGGTTTCCTTTTGGAAAACATCTCAATTAAAGGAGAATCCTCTAACAATCATACAACTCCTTCAAGTAATGAAATATCTATCACCTTGTTAGCAGCCAGGTAA 2487 0.3965 MAILPYVPVLPYLLFFFSGFSFATDTITRFESFSDGKTLVSKNGIFELGFFSPGSSTDRYVGIWYHKIPERTVVWVANRDRPIKNNFGMLSINREGHLLLSHNKTIVWLANSTTRALSPIVQLLSSGNLVLRDGEDQKPQNYLWQSFDYPSDTILPGMKFGWDLRTGLNRRYTAWKNWDDPSFGDFTAELVLHCYPDLVNWQGPTEYVRSGPWNGVRFSGISYATSNPLYEARFVWNKDEIYSVHNVINESLITRFVYNQTLYSLLDTIWSEDDQRWITFSFAPIDNCDRYNRCGPNGNCVLGDTPICQCLTGFLPKSPENWKAMNWAEGCVRNRSWSCKEKNRDYFVKFGRLKLPDTTYTWVNKSMTLEECKAKCWENCSCNAYANSNIKEGGSGCAMWFGDLIDIRQIPFDDQDLYIRLASPETAKHDEANGNKTKVIVVTATTVLAVVMLLALFCIYKCRRNSIANKKEGSEGNMELKTLLAVNNEEGYEGNMELHIYDLAVIANATNNFSSDNKLGQGGFGPVYRGMLADGQEIAVKRLSQSSYQGLCEFKNEVKLCAKLQHRNLVKVLGCCVQGEEKMLIYEYMPNKSLDSFIFGSESKFLNWSKRFHIICGIARGLVYLHQDSRLRIVHRDLKASNILLDSELNPKISDFGLARIFGGDQIEDNTRQIVGTYGYMAPEYAIHGLFSIKSDVFSFGVLLLEIVSGMKNRGPFLPSQSVNLIGHAWRLWNEGIPLKFADEHLGNSCTESKVLRCIHIGLLCLQCHANDRPDMTSVVIMLSSESVLPQPKEPGFLLENISIKGESSNNHTTPSSNEISITLLAAR 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1101 828 Gene3D - 20 147 IPR036426 -
Prci6g1101 828 Pfam S-locus glycoprotein domain 209 318 IPR000858 GO:0048544
Prci6g1101 828 Pfam D-mannose binding lectin 72 176 IPR001480 -
Prci6g1101 828 ProSiteProfiles PAN/Apple domain profile. 339 422 IPR003609 -
Prci6g1101 828 SUPERFAMILY Protein kinase-like (PK-like) 499 797 IPR011009 -
Prci6g1101 828 CDD STKc_IRAK 519 783 - -
Prci6g1101 828 ProSiteProfiles EGF-like domain profile. 284 320 IPR000742 -
Prci6g1101 828 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Prci6g1101 828 SMART serkin_6 513 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1101 828 ProSiteProfiles Protein kinase domain profile. 513 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1101 828 ProSiteProfiles Bulb-type lectin domain profile. 24 144 IPR001480 -
Prci6g1101 828 Pfam Domain of unknown function (DUF3403) 784 828 IPR021820 GO:0004674
Prci6g1101 828 Gene3D Transferase(Phosphotransferase) domain 1 589 791 - -
Prci6g1101 828 Pfam Protein tyrosine and serine/threonine kinase 516 713 IPR001245 GO:0004672|GO:0006468
Prci6g1101 828 PIRSF SRK 1 828 IPR024171 GO:0004674
Prci6g1101 828 SMART blect_4 30 150 IPR001480 -
Prci6g1101 828 SMART ntp_6 342 421 IPR003609 -
Prci6g1101 828 Gene3D Phosphorylase Kinase; domain 1 487 588 - -
Prci6g1101 828 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 774 - -
Prci6g1101 828 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 181 IPR036426 -
Prci6g1101 828 MobiDBLite consensus disorder prediction 808 828 - -
Prci6g1101 828 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 589 791 - -
Prci6g1101 828 Pfam PAN-like domain 339 407 IPR003609 -
Prci6g1101 828 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 478 588 - -
Prci6g1101 828 CDD B_lectin 31 150 IPR001480 -
Prci6g1101 828 CDD PAN_AP_plant 338 422 - -
Prci6g1101 828 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1101 Prci-Chr6 7717987 7721461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1101 439 801 Receptor kinase-like Gene Family AT4G23230 51.233 2.86e-122 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci6g1101 PK_Tyr_Ser-Thr 3.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1101 - - pcin:129322539 1066.22