Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1100 ATGGCTATTCTTCCTTATGTGCCTGTTCTTCCATATCTGCTTTTCTTCTTCTCCGGATTTTCTTTTGCAACTGATACCATTACTCGCTTTGAGTCTTTTTCTGATGGCAAGACCTTGGTTTCTAAAAACGGAATATTTGAATTAGGTTTCTTCAGCCCAGGGAGTTCCACAGACCGCTATGTTGGAATCTGGTACCACAAGATCCCGGAGAGAACTGTTGTTTGGGTTGCTAACCGTGATAGACCCATCAAAAACAACTTTGGCATGTTGAGCATAAACAGAGAGGGACATCTACTTCTCAGCCATAATAAGACTATTGTTTGGCTGGCAAATTCCACCACAAGGGCCTTGAGTCCGATTGTGCAGCTTTTGAGCTCTGGAAACTTGGTGCTAAGAGATGGGGAAGATCAAAAGCCCCAAAACTACTTGTGGCAAAGCTTCGACTATCCTTCTGATACGATTTTGCCAGGAATGAAGTTTGGATGGGACCTGAGAACTGGGCTTAATCGACGTTATACAGCATGGAAGAATTGGGATGACCCTTCTTTTGGAGACTTTACAGCAGAGCTTGTACTACACTGTTATCCTGATTTAGTAAACTGGCAAGGCCCAACAGAGTATGTAAGGAGTGGCCCCTGGAATGGTGTTCGGTTCAGTGGCATCTCTTATGCGACGAGCAATCCACTTTATGAAGCAAGGTTTGTATGGAATAAAGATGAGATTTATTCAGTGCATAATGTCATAAATGAGTCACTGATTACTAGATTTGTCTACAACCAAACATTATACTCACTACTGGATACAATATGGAGTGAAGATGATCAAAGGTGGATTACATTTAGTTTTGCACCAATTGATAATTGTGATAGATATAATCGTTGCGGCCCAAATGGAAACTGTGTCTTGGGGGACACACCAATATGCCAGTGCTTAACCGGATTCTTGCCAAAATCACCAGAAAATTGGAAGGCAATGAATTGGGCTGAAGGATGTGTCCGCAATAGATCATGGAGTTGCAAGGAAAAAAATAGGGATTATTTTGTCAAATTTGGTAGGCTGAAATTGCCAGATACTACATATACTTGGGTGAATAAGAGTATGACACTTGAGGAATGCAAAGCCAAATGCTGGGAAAATTGTTCTTGTAATGCTTATGCTAATTCAAATATCAAGGAAGGAGGTAGTGGTTGTGCTATGTGGTTCGGTGATTTAATTGATATAAGGCAGATTCCCTTTGATGATCAAGATTTATATATTCGTCTAGCTTCTCCAGAAACAGCGAAACATGATGAAGCTAATGGAAATAAGACAAAAGTGATTGTTGTAACAGCAACCACTGTATTGGCTGTTGTGATGCTTTTGGCTCTGTTTTGCATTTACAAGTGCAGAAGAAACTCTATAGCAAACAAGAAGGAAGGTTCTGAAGGAAATATGGAGCTAAAAACCTTGTTGGCAGTAAACAATGAAGAAGGCTATGAAGGAAATATGGAGCTACATATCTATGACCTAGCAGTAATAGCTAACGCTACTAATAACTTCTCATCTGACAACAAGCTTGGCCAAGGTGGCTTTGGGCCAGTATACAGGGGTATGCTTGCAGACGGACAAGAAATTGCGGTGAAACGGCTTTCACAAAGTTCTTACCAAGGGTTGTGTGAATTTAAGAATGAAGTCAAATTGTGTGCCAAACTTCAGCATCGTAATCTTGTTAAGGTCCTTGGTTGTTGCGTTCAAGGAGAAGAAAAAATGCTAATATATGAATACATGCCCAACAAGAGCTTAGATTCATTTATTTTTGATTTTGGCTTGGCAAGAATATTTGGAGGGGATCAAATTGAAGATAATACAAGGCAAATAGTTGGTACATATGGTTATATGGCTCCTGAATATGCAATTCATGGACTGTTCTCTATCAAATCTGACGTATTCAGCTTTGGAGTATTACTGTTGGAAATAGTGAGTGGCATGAAAAATAGGGGCCCTTTCTTGCCAAGCCAAAGCGTTAATCTTATTGGACATGCATGGAGGTTGTGGAATGAGGGAATCCCACTAAAATTCGCTGATGAACATTTGGGGAACTCTTGCACTGAATCAAAAGTATTACGGTGCATTCACATTGGTCTTCTTTGTTTGCAATGCCATGCTAATGATAGGCCAGACATGACATCTGTGGTTATAATGTTGAGTAGTGAGAGTGTCTTGCCCCAACCTAAAGAACCAGGTTTCCTTTTGGAAAACATCTCAATTAAAGGAGAATCCTCTAACAATCATACAACTCCTTCAAGTAATGAAATATCTATCACCTTGTTAGCAGCCAGGTAA 2322 0.4014 MAILPYVPVLPYLLFFFSGFSFATDTITRFESFSDGKTLVSKNGIFELGFFSPGSSTDRYVGIWYHKIPERTVVWVANRDRPIKNNFGMLSINREGHLLLSHNKTIVWLANSTTRALSPIVQLLSSGNLVLRDGEDQKPQNYLWQSFDYPSDTILPGMKFGWDLRTGLNRRYTAWKNWDDPSFGDFTAELVLHCYPDLVNWQGPTEYVRSGPWNGVRFSGISYATSNPLYEARFVWNKDEIYSVHNVINESLITRFVYNQTLYSLLDTIWSEDDQRWITFSFAPIDNCDRYNRCGPNGNCVLGDTPICQCLTGFLPKSPENWKAMNWAEGCVRNRSWSCKEKNRDYFVKFGRLKLPDTTYTWVNKSMTLEECKAKCWENCSCNAYANSNIKEGGSGCAMWFGDLIDIRQIPFDDQDLYIRLASPETAKHDEANGNKTKVIVVTATTVLAVVMLLALFCIYKCRRNSIANKKEGSEGNMELKTLLAVNNEEGYEGNMELHIYDLAVIANATNNFSSDNKLGQGGFGPVYRGMLADGQEIAVKRLSQSSYQGLCEFKNEVKLCAKLQHRNLVKVLGCCVQGEEKMLIYEYMPNKSLDSFIFDFGLARIFGGDQIEDNTRQIVGTYGYMAPEYAIHGLFSIKSDVFSFGVLLLEIVSGMKNRGPFLPSQSVNLIGHAWRLWNEGIPLKFADEHLGNSCTESKVLRCIHIGLLCLQCHANDRPDMTSVVIMLSSESVLPQPKEPGFLLENISIKGESSNNHTTPSSNEISITLLAAR 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1100 773 PIRSF SRK 598 773 IPR024171 GO:0004674
Prci6g1100 773 PIRSF SRK 1 600 IPR024171 GO:0004674
Prci6g1100 773 Gene3D Phosphorylase Kinase; domain 1 487 584 - -
Prci6g1100 773 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 607 733 - -
Prci6g1100 773 Pfam PAN-like domain 339 407 IPR003609 -
Prci6g1100 773 ProSiteProfiles PAN/Apple domain profile. 339 422 IPR003609 -
Prci6g1100 773 MobiDBLite consensus disorder prediction 753 773 - -
Prci6g1100 773 SMART blect_4 30 150 IPR001480 -
Prci6g1100 773 SMART ntp_6 342 421 IPR003609 -
Prci6g1100 773 ProSiteProfiles Protein kinase domain profile. 513 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1100 773 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 147 - -
Prci6g1100 773 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 181 IPR036426 -
Prci6g1100 773 Gene3D Transferase(Phosphotransferase) domain 1 585 734 - -
Prci6g1100 773 Pfam Domain of unknown function (DUF3403) 729 773 IPR021820 GO:0004674
Prci6g1100 773 Pfam Protein tyrosine and serine/threonine kinase 516 598 IPR001245 GO:0004672|GO:0006468
Prci6g1100 773 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 478 588 - -
Prci6g1100 773 Gene3D - 20 147 IPR036426 -
Prci6g1100 773 ProSiteProfiles EGF-like domain profile. 284 320 IPR000742 -
Prci6g1100 773 Pfam D-mannose binding lectin 72 176 IPR001480 -
Prci6g1100 773 Pfam S-locus glycoprotein domain 209 318 IPR000858 GO:0048544
Prci6g1100 773 SUPERFAMILY Protein kinase-like (PK-like) 499 742 IPR011009 -
Prci6g1100 773 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 719 - -
Prci6g1100 773 ProSiteProfiles Bulb-type lectin domain profile. 24 144 IPR001480 -
Prci6g1100 773 CDD PAN_AP_plant 338 422 - -
Prci6g1100 773 CDD B_lectin 31 150 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1100 Prci-Chr6 7717987 7721466 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1100 422 773 Receptor kinase-like Gene Family AT4G05200 38.242 4.16e-80 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci6g1100 S_locus_glycop 1.3e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1100 - - pcin:129322539 935.25