Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1096 ATGGAGCTGAAAAACTTGCTAGCAGTAAACAATGGAGAAGCCTATGATGGAAATGTGGAGCTGCATATCTATGACCTTGCGGTACTAGCTAATGCTACTAATAACTTCTCATCTGACAAGAAGCTTGGTCAAGGTGGTTTTGGGCCTGTATATAAGGGCACACTCATTGATGGACAAGAAATTGCAGTGAAACGACTTTCAAAAAATTCTCACCAAGGGGTGTGCGAATTTAAGAATGAAGTCAAATTATGTGCCAAACTTCAGCACCGTAATCTTGTTAGAGTTCTTGGTTGTTGTATTGAAGGAGAGGAGAAAATGCTCATATATGAATATATGCCCAACAAGAGCTTAGATTCATTTATTTTTGGTACTGAAAGTAAATTTCTAAATTGGTCCAAGCGCTATCACATTATACGAGGAATTGCTCGGGGTCTTTTATACCTCCATCAAGATTCTAGATTAAGAATTGTCCATAGAGATCTTAAAGCAAGTAATATATTATTGGATAGTGAATTCAATCCAAAAATCTCAGATTTCGGCTTGGCAAGAATATTTGGAGGAAATCAAATTGATGAGAATACACGACAAATAGTTGGTACATATGGTTATATGGCACCTGAATATGCAATTAGTGGACTATTCTCTGTTAAATCTGATGTATTCAGTTTTGGAGTATTGCTGTTAGAGATAGTGAGTGGCATGAAGAACAGGAGGCTTTTTTTGCCAAACCAAAGTGTTAATCTTATTGGACATGCATGGAGATTGTGGAAGGAGGGAATCCCACTGAAGTTGATTGATGAACATGTGGAGAAGCATTGTATTGATTCAGAAGTGTTGCGATGCATCCATATTGGTCTTCTTTGTTTACAACACCATCCTGATGATAGGCCAGACATGGCATCCGTGGTTGTAATGTTAAGCAGTGAGGGAGTCTTGCCTCAACCTAAAGAACCTGCTTTTCTTTTGGAAAACATACAAGTTGGGGGAGAATGTTCTCATAAGAATCATGCAACTCCTTCAAGTAATGAAATTACCATCACGTTGTTGGAAGCTAGATAA 1059 0.3805 MELKNLLAVNNGEAYDGNVELHIYDLAVLANATNNFSSDKKLGQGGFGPVYKGTLIDGQEIAVKRLSKNSHQGVCEFKNEVKLCAKLQHRNLVRVLGCCIEGEEKMLIYEYMPNKSLDSFIFGTESKFLNWSKRYHIIRGIARGLLYLHQDSRLRIVHRDLKASNILLDSEFNPKISDFGLARIFGGNQIDENTRQIVGTYGYMAPEYAISGLFSVKSDVFSFGVLLLEIVSGMKNRRLFLPNQSVNLIGHAWRLWKEGIPLKLIDEHVEKHCIDSEVLRCIHIGLLCLQHHPDDRPDMASVVVMLSSEGVLPQPKEPAFLLENIQVGGECSHKNHATPSSNEITITLLEAR 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1096 352 Gene3D Transferase(Phosphotransferase) domain 1 112 312 - -
Prci6g1096 352 SMART serkin_6 36 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1096 352 CDD STKc_IRAK 42 306 - -
Prci6g1096 352 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 332 - -
Prci6g1096 352 Gene3D Phosphorylase Kinase; domain 1 11 111 - -
Prci6g1096 352 ProSiteProfiles Protein kinase domain profile. 36 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1096 352 SUPERFAMILY Protein kinase-like (PK-like) 19 309 IPR011009 -
Prci6g1096 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Prci6g1096 352 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 3 111 - -
Prci6g1096 352 Pfam Domain of unknown function (DUF3403) 307 352 IPR021820 GO:0004674
Prci6g1096 352 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 112 314 - -
Prci6g1096 352 Pfam Protein tyrosine and serine/threonine kinase 38 304 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1096 Prci-Chr6 7708870 7710879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1096 10 324 Receptor kinase-like Gene Family AT4G23230 58.125 1.83e-129 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci6g1096 PK_Tyr_Ser-Thr 1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1096 - - pcin:129322539 533.102