Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1093 ATGCACCAAGTCAACTTGCATACTTCTGGTGGGCTGTCATTTCAACTTCTGCCACATCAGCATCTAGGATTTTCTTTTGCAACCGATACCATTACCCACTTTGAGTCTCTTCCTGATGGCAAGACCTTGGTTTCAGAAAATGGAATCTTTGAATTGGGTTTCTTTAGCCCAGGTAGTTCCACAGACCGTTATGTTGGAATTTGGTACCACAATATCCCAAGCAGAACTGTTGCTTGGGTTGCCAACCGTGACAGACCCATCAAAGACAACTTTGGCACACTGAGCATAAACAGAGAGGGACATCTTGTACTTCTAAGCCATAATGAGACTGTTGTTTGGTTAGCAAATTCCTCTACAAAGGCCTTGAGTCCAATTGTGCAACTTTTAGGCTCTGGGAACTTGATCCTAAGAGATGGGAAGGATCAAAAGCCCCAAAACTATTTGTGGCAAAGCTTTGACTATCCATCTGATACCCTTTTACCAGGAATGAAGATGGGTTGGGACCTGAGAACTGGTCTTAATCGACGTTATACAGCATGGAAGAATTGGGATGACCCTTCTTCTGGGAACTTTATATCAGAGATTGCACTACACAATTACCCTGAATTAGTGTATTGGCTGGGCCAAGCAGAGTATTTAAGGTTTGGGCCTTGGAATGGTGTTCGGTACAGTGGCATCTCTCATGTGACAAACAATCCACTGTATGAAACAAAGTTTGTCTGGAATAAAGATGAGGTGTATGCAGAGTATAATGTCAAAAACGAGTCACTGATTACAAGATTTGTCTTGAACCAGACATTATACTCACTACTGGACATGATATGGATTGAAGATGATGAGAGGTGGATTACTTTTAGTTATGTGCCTATTGATAACTGTGATAGATATAATCGATGCGGCCCAAATGGAAACTGTGTCATGGGTGAGACACCAATATGCCAGTGCCTGAGAGGATTCATGCCAAAATCACCCAAAAAATGGAATGCGATGGACTGGGCTGAGGGATGTGTCCGCAATAAATCATGGAGTTGTCAGGAAAAAGATAGGGATTATTTTGTCAAATTTAGTGGGCTGAAATTGCCAGATACTACATATTCTTGGGTTAATACAAGTATGACACTTGAGGAATGCAAAGCCAAATGTTGGGAAAATTGTTCTTGTACTGCTTATGCTCATTCTGATATCAAGGGAGGAGGTAGTGGTTGTATTATGTGGTTTGGTGATTTACTTGATATAAGGCAGATTTCTTTTGATGACCAAGATATATATATTCGTCTTGCTTCTCCAAAAACAGCTGGACATGACAAAGACAACGGACATATGATAGAGGTGATAGCTGTAACAGTAACCACTGTTTTGGCTCTCGTGGTGCTCTTCACTTTCATTTCCATTTACAAGCACAAAAGGAACTCTTCGGTAAACAAGGAAAAAGACTCTGAAGTAGATATGGAGCTGAAAAACTTGCTAGCAGTAAACAATGGAGAAGCCTATGATGGAAATGTGGAGCTGCATATCTATGACCTTGCGGTACTAGCTAATGCTACTAATAACTTCTCATCTGACAAGAAGCTTGGTCAAGGTGGTTTTGGGCCTGTATATAAGGGCACACTCATTGATGGACAAGAAATTGCAGTGAAACGACTTTCAAAAAATTCTCACCAAGGGGTGTGCGAATTTAAGAATGAAGTCAAATTATGTGCCAAACTTCAGCACCGTAATCTTGTTAGAGTTCTTGGTTGTTGTATTGAAGGAGAGGAGAAAATGCTCATATATGAATATATGCCCAACAAGAGCTTAGATTCATTTATTTTTGGTACTGAAAGTAAATTTCTAAATTGGTCCAAGCGCTATCACATTATACGAGGAATTGCTCGGGGTCTTTTATACCTCCATCAAGATTCTAGATTAAGAATTGTCCATAGAGATCTTAAAGCAAGTAATATATTATTGGATAGTGAATTCAATCCAAAAATCTCAGATTTCGGCTTGGCAAGAATATTTGGAGGAAATCAAATTGATGAGAATACACGACAAATAGTTGGTACATATGGTTATATGGCACCTGAATATGCAATTAGTGGACTATTCTCTGTTAAATCTGATGTATTCAGTTTTGGAGTATTGCTGTTAGAGATAGTGAGTGGCATGAAGAACAGGAGGCTTTTTTTGCCAAACCAAAGTGTTAATCTTATTGGACATGCATGGAGATTGTGGAAGGAGGGAATCCCACTGAAGTTGATTGATGAACATGTGGAGAAGCATTGTATTGATTCAGAAGTGTTGCGATGCATCCATATTGGTCTTCTTTGTTTACAACACCATCCTGATGATAGGCCAGACATGGCATCCGTGGTTGTAATGTTAAGCAGTGAGGGAGTCTTGCCTCAACCTAAAGAACCTGCTTTTCTTTTGGAAAACATACAAGTTGGGGGAGAATGTTCTCATAAGAATCATGCAACTCCTTCAAGTAATGAAATTACCATCACGTTGTTGGAAGCTAGATAA 2505 0.398 MHQVNLHTSGGLSFQLLPHQHLGFSFATDTITHFESLPDGKTLVSENGIFELGFFSPGSSTDRYVGIWYHNIPSRTVAWVANRDRPIKDNFGTLSINREGHLVLLSHNETVVWLANSSTKALSPIVQLLGSGNLILRDGKDQKPQNYLWQSFDYPSDTLLPGMKMGWDLRTGLNRRYTAWKNWDDPSSGNFISEIALHNYPELVYWLGQAEYLRFGPWNGVRYSGISHVTNNPLYETKFVWNKDEVYAEYNVKNESLITRFVLNQTLYSLLDMIWIEDDERWITFSYVPIDNCDRYNRCGPNGNCVMGETPICQCLRGFMPKSPKKWNAMDWAEGCVRNKSWSCQEKDRDYFVKFSGLKLPDTTYSWVNTSMTLEECKAKCWENCSCTAYAHSDIKGGGSGCIMWFGDLLDIRQISFDDQDIYIRLASPKTAGHDKDNGHMIEVIAVTVTTVLALVVLFTFISIYKHKRNSSVNKEKDSEVDMELKNLLAVNNGEAYDGNVELHIYDLAVLANATNNFSSDKKLGQGGFGPVYKGTLIDGQEIAVKRLSKNSHQGVCEFKNEVKLCAKLQHRNLVRVLGCCIEGEEKMLIYEYMPNKSLDSFIFGTESKFLNWSKRYHIIRGIARGLLYLHQDSRLRIVHRDLKASNILLDSEFNPKISDFGLARIFGGNQIDENTRQIVGTYGYMAPEYAISGLFSVKSDVFSFGVLLLEIVSGMKNRRLFLPNQSVNLIGHAWRLWKEGIPLKLIDEHVEKHCIDSEVLRCIHIGLLCLQHHPDDRPDMASVVVMLSSEGVLPQPKEPAFLLENIQVGGECSHKNHATPSSNEITITLLEAR 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1093 834 Gene3D - 24 152 IPR036426 -
Prci6g1093 834 Pfam Protein tyrosine and serine/threonine kinase 520 786 IPR001245 GO:0004672|GO:0006468
Prci6g1093 834 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 482 593 - -
Prci6g1093 834 SUPERFAMILY Hairpin loop containing domain-like 348 415 - -
Prci6g1093 834 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 594 796 - -
Prci6g1093 834 Pfam PAN-like domain 344 412 IPR003609 -
Prci6g1093 834 PIRSF SRK 2 834 IPR024171 GO:0004674
Prci6g1093 834 ProSiteProfiles PAN/Apple domain profile. 344 428 IPR003609 -
Prci6g1093 834 CDD B_lectin 35 155 IPR001480 -
Prci6g1093 834 Pfam S-locus glycoprotein domain 214 323 IPR000858 GO:0048544
Prci6g1093 834 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 186 IPR036426 -
Prci6g1093 834 SMART ntp_6 347 426 IPR003609 -
Prci6g1093 834 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 152 - -
Prci6g1093 834 Pfam Domain of unknown function (DUF3403) 789 834 IPR021820 GO:0004674
Prci6g1093 834 CDD PAN_AP_plant 343 427 - -
Prci6g1093 834 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Prci6g1093 834 SUPERFAMILY Protein kinase-like (PK-like) 501 790 IPR011009 -
Prci6g1093 834 Gene3D Transferase(Phosphotransferase) domain 1 594 794 - -
Prci6g1093 834 SMART serkin_6 518 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1093 834 Pfam D-mannose binding lectin 76 181 IPR001480 -
Prci6g1093 834 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 343 426 - -
Prci6g1093 834 Gene3D Phosphorylase Kinase; domain 1 493 593 - -
Prci6g1093 834 ProSiteProfiles Protein kinase domain profile. 518 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1093 834 ProSiteProfiles EGF-like domain profile. 289 325 IPR000742 -
Prci6g1093 834 SMART blect_4 34 155 IPR001480 -
Prci6g1093 834 CDD STKc_IRAK 524 788 - -
Prci6g1093 834 ProSiteProfiles Bulb-type lectin domain profile. 28 149 IPR001480 -
Prci6g1093 834 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 25 778 - -
Prci6g1093 834 Gene3D Hepatocyte Growth Factor 344 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1093 Prci-Chr6 7708870 7713471 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1093 442 806 Receptor kinase-like Gene Family AT4G23230 52.703 8.54e-124 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci6g1093 PK_Tyr_Ser-Thr 9.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1093 - - pcin:129322539 1038.87