Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1092 ATGCACCAAGTCAACTTGCATACTTCTGGTGGGCTGTCATTTCAACTTCTGCCACATCAGCATCTAGGATTTTCTTTTGCAACCGATACCATTACCCACTTTGAGTCTCTTCCTGATGGCAAGACCTTGGTTTCAGAAAATGGAATCTTTGAATTGGGTTTCTTTAGCCCAGGTAGTTCCACAGACCGTTATGTTGGAATTTGGTACCACAATATCCCAAGCAGAACTGTTGCTTGGGTTGCCAACCGTGACAGACCCATCAAAGACAACTTTGGCACACTGAGCATAAACAGAGAGGGACATCTTGTACTTCTAAGCCATAATGAGACTGTTGTTTGGTTAGCAAATTCCTCTACAAAGGCCTTGAGTCCAATTGTGCAACTTTTAGGCTCTGGGAACTTGATCCTAAGAGATGGGAAGGATCAAAAGCCCCAAAACTATTTGTGGCAAAGCTTTGACTATCCATCTGATACCCTTTTACCAGGAATGAAGATGGGTTGGGACCTGAGAACTGGTCTTAATCGACGTTATACAGCATGGAAGAATTGGGATGACCCTTCTTCTGGGAACTTTATATCAGAGATTGCACTACACAATTACCCTGAATTAGTGTATTGGCTGGGCCAAGCAGAGTATTTAAGGTTTGGGCCTTGGAATGGTGTTCGGTACAGTGGCATCTCTCATGTGACAAACAATCCACTGTATGAAACAAAGTTTGTCTGGAATAAAGATGAGGTGTATGCAGAGTATAATGTCAAAAACGAGTCACTGATTACAAGATTTGTCTTGAACCAGACATTATACTCACTACTGGACATGATATGGATTGAAGATGATGAGAGGTGGATTACTTTTAGTTATGTGCCTATTGATAACTGTGATAGATATAATCGATGCGGCCCAAATGGAAACTGTGTCATGGGTGAGACACCAATATGCCAGTGCCTGAGAGGATTCATGCCAAAATCACCCAAAAAATGGAATGCGATGGACTGGGCTGAGGGATGTGTCCGCAATAAATCATGGAGTTGTCAGGAAAAAGATAGGGATTATTTTGTCAAATTTAGTGGGCTGAAATTGCCAGATACTACATATTCTTGGGTTAATACAAGTATGACACTTGAGGAATGCAAAGCCAAATGTTGGGAAAATTGTTCTTGTACTGCTTATGCTCATTCTGATATCAAGGGAGGAGGTAGTGGTTGTATTATGTGGTTTGGTGATTTACTTGATATAAGGCAGATTTCTTTTGATGACCAAGATATATATATTCGTCTTGCTTCTCCAAAAACAGCTGGACATGACAAAGACAACGGACATATGATAGAGGTGATAGCTGTAACAGTAACCACTGTTTTGGCTCTCGTGGTGCTCTTCACTTTCATTTCCATTTACAAGCACAAAAGGAACTCTTCGGGTACTGAAAGTAAATTTCTAAATTGGTCCAAGCGCTATCACATTATACGAGGAATTGCTCGGGGTCTTTTATACCTCCATCAAGATTCTAGATTAAGAATTGTCCATAGAGATCTTAAAGCAAGTAATATATTATTGGATAGTGAATTCAATCCAAAAATCTCAGATTTCGGCTTGGCAAGAATATTTGGAGGAAATCAAATTGATGAGAATACACGACAAATAGTTGGTACATATGGTTATATGGCACCTGAATATGCAATTAGTGGACTATTCTCTGTTAAATCTGATGTATTCAGTTTTGGAGTATTGCTGTTAGAGATAGTGAGTGGCATGAAGAACAGGAGGCTTTTTTTGCCAAACCAAAGTGTTAATCTTATTGGACATGCATGGAGATTGTGGAAGGAGGGAATCCCACTGAAGTTGATTGATGAACATGTGGAGAAGCATTGTATTGATTCAGAAGTGTTGCGATGCATCCATATTGGTCTTCTTTGTTTACAACACCATCCTGATGATAGGCCAGACATGGCATCCGTGGTTGTAATGTTAAGCAGTGAGGGAGTCTTGCCTCAACCTAAAGAACCTGCTTTTCTTTTGGAAAACATACAAGTTGGGGGAGAATGTTCTCATAAGAATCATGCAACTCCTTCAAGTAATGAAATTACCATCACGTTGTTGGAAGCTAGATAA 2109 0.4011 MHQVNLHTSGGLSFQLLPHQHLGFSFATDTITHFESLPDGKTLVSENGIFELGFFSPGSSTDRYVGIWYHNIPSRTVAWVANRDRPIKDNFGTLSINREGHLVLLSHNETVVWLANSSTKALSPIVQLLGSGNLILRDGKDQKPQNYLWQSFDYPSDTLLPGMKMGWDLRTGLNRRYTAWKNWDDPSSGNFISEIALHNYPELVYWLGQAEYLRFGPWNGVRYSGISHVTNNPLYETKFVWNKDEVYAEYNVKNESLITRFVLNQTLYSLLDMIWIEDDERWITFSYVPIDNCDRYNRCGPNGNCVMGETPICQCLRGFMPKSPKKWNAMDWAEGCVRNKSWSCQEKDRDYFVKFSGLKLPDTTYSWVNTSMTLEECKAKCWENCSCTAYAHSDIKGGGSGCIMWFGDLLDIRQISFDDQDIYIRLASPKTAGHDKDNGHMIEVIAVTVTTVLALVVLFTFISIYKHKRNSSGTESKFLNWSKRYHIIRGIARGLLYLHQDSRLRIVHRDLKASNILLDSEFNPKISDFGLARIFGGNQIDENTRQIVGTYGYMAPEYAISGLFSVKSDVFSFGVLLLEIVSGMKNRRLFLPNQSVNLIGHAWRLWKEGIPLKLIDEHVEKHCIDSEVLRCIHIGLLCLQHHPDDRPDMASVVVMLSSEGVLPQPKEPAFLLENIQVGGECSHKNHATPSSNEITITLLEAR 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1092 702 ProSiteProfiles Protein kinase domain profile. 390 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1092 702 SUPERFAMILY Hairpin loop containing domain-like 348 416 - -
Prci6g1092 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 506 518 IPR008271 GO:0004672|GO:0006468
Prci6g1092 702 Gene3D - 24 152 IPR036426 -
Prci6g1092 702 PIRSF SRK 2 477 IPR024171 GO:0004674
Prci6g1092 702 PIRSF SRK 470 702 IPR024171 GO:0004674
Prci6g1092 702 Gene3D Transferase(Phosphotransferase) domain 1 463 662 - -
Prci6g1092 702 Pfam PAN-like domain 344 412 IPR003609 -
Prci6g1092 702 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 467 664 - -
Prci6g1092 702 CDD PAN_AP_plant 343 427 - -
Prci6g1092 702 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 186 IPR036426 -
Prci6g1092 702 SUPERFAMILY Protein kinase-like (PK-like) 474 658 IPR011009 -
Prci6g1092 702 SMART serkin_6 390 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1092 702 ProSiteProfiles PAN/Apple domain profile. 344 428 IPR003609 -
Prci6g1092 702 CDD B_lectin 35 155 IPR001480 -
Prci6g1092 702 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 152 - -
Prci6g1092 702 Pfam Protein tyrosine and serine/threonine kinase 475 654 IPR001245 GO:0004672|GO:0006468
Prci6g1092 702 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 25 462 - -
Prci6g1092 702 ProSiteProfiles EGF-like domain profile. 289 325 IPR000742 -
Prci6g1092 702 SMART blect_4 34 155 IPR001480 -
Prci6g1092 702 Pfam D-mannose binding lectin 76 181 IPR001480 -
Prci6g1092 702 ProSiteProfiles Bulb-type lectin domain profile. 28 149 IPR001480 -
Prci6g1092 702 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 343 426 - -
Prci6g1092 702 Gene3D Hepatocyte Growth Factor 344 427 - -
Prci6g1092 702 SMART ntp_6 347 426 IPR003609 -
Prci6g1092 702 Pfam S-locus glycoprotein domain 214 323 IPR000858 GO:0048544
Prci6g1092 702 Pfam Domain of unknown function (DUF3403) 657 702 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1092 Prci-Chr6 7708870 7713472 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1092 479 674 Receptor kinase-like Gene Family AT4G23150 59.391 7.67e-78 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci6g1092 PK_Tyr_Ser-Thr 3.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1092 - - vvo:131657236 719.539