Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1089 ATGGCCACTCTTCTTCCTCTCATTCTCGCTTTCATGGTCAATTCACTTTCGCTTTCTTCTGCAACTGATACTCTCACACAGTCTCATCCCCTCGTCGACGACGCCAACGGAACCACCTACTTGGTTTCCAGTGACGGAACCTTCCAACTCGGCTTCTTCTCTCCAGGCTCTTCCTCGAATCGCTACCTGGGCATCTGGTACACAAACATCCCCGATACGACCGTCGTCTGGGTGGCCAACCGCCAAACGCCCCTCAGAAACGACACCAACTTCACAACTCCCAGTCGTTTGACCATAACCGACGAGAGAGGTCTCGTGCTCCTCAGCCAAAACGGCACCGTTGTTTGGTCGGCAAACACTACGGTTAAAAGCTCGAGTTTGAAAAATGGCACTGTTGTTGCGCAGCTTTTGGATTCAGGGAACTTGGTTCTGAGAAATGAACGGGGCGAGGTTGATGATGATGGTGAGGAGTATATATGGCAGAGTTTTGATTATCCGACTGACACGTTCTTGCCTGGAATGAAGATTGGGTGGGATCTGAGAAGAGGGATAAACAGGGAATTGAGGGCGTGGAAGAGTTGGGACGATCCTTCTGTGGGAGATCTGAGATGGGGCATGGTGCTCGGAGTGACGCCGGAGCTGGTGATGTGGAAGGGAGAAGAAGAGTACTATAGGAGTGGTCCTTGGAATGGAGCTATTTTCAGCGGGAAAACTACACCGATCTTCGAGCTGCAATTCGTCTCTAATCAAGATGAGGTGGTTTACACTTCCAAGCTTCAGAACAAATCAGTGATAACAAGGGTTGTACTGAACGGAACTACGTCTTATCGTCAGCGCTATAACTGGGTTGAGCAAACTAAAAGCTGGAGGCTTTATTCATCTGTGCCCAGAGATAACTGCGACAACTACAATCTCTGTGGTCCCTATGGAAATTGCATCGTTAATGATTCTCCACCCTGCCAGTGTCTATCAGGGTTCCAGGCAAAATCACCCCAAAACTACAATGCATTGGACTGGACCCAGGGATGTGTTCGCAGTGAATTGTGGAGTTGTGGGGTCAAAAATAGAGATGGGTTTCGAAGATTCAGTGGATTGAAAATGCCAGATACTAGAAAAGCTTGGGTTAATGCAAGTATGACACTTGGGGATTGCAGGATGAAATGCTTGGCAACTTGTTCCTGTACTGCTTATGCAAACTTGTATGCTACTGGAGGAGGTAGTGGGTGTCTCATTTGGTTTGGTGACCTTGTTGATTTGAGAGTGGCTTCCACTCCTGGCCAAGATCTGTATATTCGAATGGCTGCCGCGGAGACTGATGCAAAAGAGCATAAGAAAATGGTGTGGGTGGTGGTGATAGCAGTTACTGTTCCACTGGTTATCGTGGTGCTTTTGGCTTTCTCTTGCATTCGTTGGCGGAAAAGAAATCATAGAGAGAAAATCTCCATAGAGAATATCAATAAAGGTGAACAAGAGGACTTGGAACTGCCATTTTATGACCTTGCTACGATTGTTAATGCCACTAATGACTTCTCAAATGACAAGAAGCTTGGCCAAGGTGGCTTTGGACCAGTATACATGGGTATACTAGCAGATGGACAAGAGATTGCTGTCAAGAGGTTATCCCAGAGCTCTGGACAAGGAATGCAAGAATTTAAGAATGAAGTTTTATTGTGTGCCAAACTTCAACACCGAAATCTTGTCAAGGTTCTAGGTTGTTGCATCCAAGGAGAGGAGAAGATGCTCATCTATGAGTACATGCCCAACAAAAGCCTAGATAACCTTTTGTTCGATTCCAATCAAAGCAAAAACCTAGAATGGTCTAGGCGCTTTCACATTATATTTGGAATTGCACGAGGGCTTCTTTATCTTCATCAAGATTCCAGATTGAGGATTATACATCGAGATCTTAAAGCAAGTAATATTTTGTTAGATGGTAAGATGAACCCAAAAATTTCAGATTTTGGCATGGCAAGAATGTTTGGTGGTGATCAGATTGAAGGAAACACAAATAGAATAGCTGGTACCTATGGTTATATGTCACCAGAATATGCTATTCATGGGCTATTCTCTATTAAATCTGATGTGTTTAGCTTTGGTGTATTATTGCTGGAAATAATAACTGGAAAGAAAAACCGAGGAGCTTCTTATCCAAGCCAGGGTTTTAACCTCATTGGCTTTGCATGGAGATTGTGGAAGGAGGGCAACATATTGGAACTAATTGATGGTTGTTTGGGAGAAGCTTTTAATTTATCAGAAGCATCGCGCTGTATTCATGTGGGTCTTCTATGTGTGCAACTGCATCCTGAGGATAGGCCAAACATGGCCTCTGTAATTGTGATGTTGAGTAGTGAGAATGTGTTGCCTGAGCCTAAGGAGCCAGGTTTCTTGATAGAGAGGATTATGATGGGAGAAGAATGTGGTTCTTCTGGCAAGCAGACATCTTCAACTAATGAAGTAACTATGTCTCAGTTGGAGGCCAGATAA 2484 0.4465 MATLLPLILAFMVNSLSLSSATDTLTQSHPLVDDANGTTYLVSSDGTFQLGFFSPGSSSNRYLGIWYTNIPDTTVVWVANRQTPLRNDTNFTTPSRLTITDERGLVLLSQNGTVVWSANTTVKSSSLKNGTVVAQLLDSGNLVLRNERGEVDDDGEEYIWQSFDYPTDTFLPGMKIGWDLRRGINRELRAWKSWDDPSVGDLRWGMVLGVTPELVMWKGEEEYYRSGPWNGAIFSGKTTPIFELQFVSNQDEVVYTSKLQNKSVITRVVLNGTTSYRQRYNWVEQTKSWRLYSSVPRDNCDNYNLCGPYGNCIVNDSPPCQCLSGFQAKSPQNYNALDWTQGCVRSELWSCGVKNRDGFRRFSGLKMPDTRKAWVNASMTLGDCRMKCLATCSCTAYANLYATGGGSGCLIWFGDLVDLRVASTPGQDLYIRMAAAETDAKEHKKMVWVVVIAVTVPLVIVVLLAFSCIRWRKRNHREKISIENINKGEQEDLELPFYDLATIVNATNDFSNDKKLGQGGFGPVYMGILADGQEIAVKRLSQSSGQGMQEFKNEVLLCAKLQHRNLVKVLGCCIQGEEKMLIYEYMPNKSLDNLLFDSNQSKNLEWSRRFHIIFGIARGLLYLHQDSRLRIIHRDLKASNILLDGKMNPKISDFGMARMFGGDQIEGNTNRIAGTYGYMSPEYAIHGLFSIKSDVFSFGVLLLEIITGKKNRGASYPSQGFNLIGFAWRLWKEGNILELIDGCLGEAFNLSEASRCIHVGLLCVQLHPEDRPNMASVIVMLSSENVLPEPKEPGFLIERIMMGEECGSSGKQTSSTNEVTMSQLEAR 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1089 827 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 17 163 - -
Prci6g1089 827 MobiDBLite consensus disorder prediction 807 827 - -
Prci6g1089 827 MobiDBLite consensus disorder prediction 806 827 - -
Prci6g1089 827 PIRSF SRK 1 827 IPR024171 GO:0004674
Prci6g1089 827 ProSiteProfiles EGF-like domain profile. 296 332 IPR000742 -
Prci6g1089 827 Pfam S-locus glycoprotein domain 224 329 IPR000858 GO:0048544
Prci6g1089 827 ProSiteProfiles PAN/Apple domain profile. 351 434 IPR003609 -
Prci6g1089 827 Gene3D Phosphorylase Kinase; domain 1 468 585 - -
Prci6g1089 827 ProSiteProfiles Protein kinase domain profile. 510 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1089 827 ProSiteProfiles Bulb-type lectin domain profile. 22 157 IPR001480 -
Prci6g1089 827 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Prci6g1089 827 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 197 IPR036426 -
Prci6g1089 827 SUPERFAMILY Protein kinase-like (PK-like) 493 789 IPR011009 -
Prci6g1089 827 CDD B_lectin 40 166 IPR001480 -
Prci6g1089 827 Gene3D Transferase(Phosphotransferase) domain 1 586 789 - -
Prci6g1089 827 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 772 - -
Prci6g1089 827 Pfam Protein tyrosine and serine/threonine kinase 512 779 IPR001245 GO:0004672|GO:0006468
Prci6g1089 827 SMART ntp_6 354 433 IPR003609 -
Prci6g1089 827 Gene3D - 17 163 IPR036426 -
Prci6g1089 827 CDD PAN_AP_plant 350 434 - -
Prci6g1089 827 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 475 585 - -
Prci6g1089 827 Pfam D-mannose binding lectin 74 192 IPR001480 -
Prci6g1089 827 SMART serkin_6 510 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1089 827 Pfam Domain of unknown function (DUF3403) 782 827 IPR021820 GO:0004674
Prci6g1089 827 SMART blect_4 32 166 IPR001480 -
Prci6g1089 827 Pfam PAN-like domain 351 419 IPR003609 -
Prci6g1089 827 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 586 789 - -
Prci6g1089 827 CDD STKc_IRAK 516 781 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1089 Prci-Chr6 7691474 7696122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1089 450 796 Receptor kinase-like Gene Family AT4G23190 55.775 1.31e-132 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci6g1089 PK_Tyr_Ser-Thr 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1089 - - gmx:100790436 1011.52