Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1087 ATGGCCACTCTTCTTCCTCTCATTCTCGCTTTCATGGTCAATTCACTTTCGCTTTCTTCTGCAACTGATACTCTCACACAGTCTCATCCCCTCGTCGACGACGCCAACGGAACCACCTACTTGGTTTCCAGTGACGGAACCTTCCAACTCGGCTTCTTCTCTCCAGGCTCTTCCTCGAATCGCTACCTGGGCATCTGGTACACAAACATCCCCGATACGACCGTCGTCTGGGTGGCCAACCGCCAAACGCCCCTCAGAAACGACACCAACTTCACAACTCCCAGTCGTTTGACCATAACCGACGAGAGAGGTCTCGTGCTCCTCAGCCAAAACGGCACCGTTGTTTGGTCGGCAAACACTACGGTTAAAAGCTCGAGTTTGAAAAATGGCACTGTTGTTGCGCAGCTTTTGGATTCAGGGAACTTGGTTCTGAGAAATGAACGGGGCGAGGTTGATGATGATGGTGAGGAGTATATATGGCAGAGTTTTGATTATCCGACTGACACGTTCTTGCCTGGAATGAAGATTGGGTGGGATCTGAGAAGAGGGATAAACAGGGAATTGAGGGCGTGGAAGAGTTGGGACGATCCTTCTGTGGGAGATCTGAGATGGGGCATGGTGCTCGGAGTGACGCCGGAGCTGGTGATGTGGAAGGGAGAAGAAGAGTACTATAGGAGTGGTCCTTGGAATGGAGCTATTTTCAGCGGGAAAACTACACCGATCTTCGAGCTGCAATTCGTCTCTAATCAAGATGAGGTGGTTTACACTTCCAAGCTTCAGAACAAATCAGTGATAACAAGGGTTGTACTGAACGGAACTACGTCTTATCGTCAGCGCTATAACTGGGTTGAGCAAACTAAAAGCTGGAGGCTTTATTCATCTGTGCCCAGAGATAACTGCGACAACTACAATCTCTGTGGTCCCTATGGAAATTGCATCGTTAATGATTCTCCACCCTGCCAGTGTCTATCAGGGTTCCAGGCAAAATCACCCCAAAACTACAATGCATTGGACTGGACCCAGGGATGTGTTCGCAGTGAATTGTGGAGTTGTGGGGTCAAAAATAGAGATGGGTTTCGAAGATTCAGTGGATTGAAAATGCCAGATACTAGAAAAGCTTGGGTTAATGCAAGTATGACACTTGGGGATTGCAGGATGAAATGCTTGGCAACTTGTTCCTGTACTGCTTATGCAAACTTGTATGCTACTGGAGGAGGTAGTGGGTGTCTCATTTGGTTTGGTGACCTTGTTGATTTGAGAGTGGCTTCCACTCCTGGCCAAGATCTGTATATTCGAATGGCTGCCGCGGAGACTGATGCAAAAGAGCATAAGAAAATGGTGTGGGTGGTGGTGATAGCAGTTACTGTTCCACTGGTTATCGTGGTGCTTTTGGCTTTCTCTTGCATTCGTTGGCGGAAAAGAAATCATAGAGAGAAAATCTCCATAGAGAATATCAATAAAGGTGAACAAGAGGACTTGGAACTGCCATTTTATGACCTTGCTACGATTGTTAATGCCACTAATGACTTCTCAAATGACAAGAAGCTTGGCCAAGGTGGCTTTGGACCAGTATACATGGGTATACTAGCAGATGGACAAGAGATTGCTGTCAAGAGGTTATCCCAGAGCTCTGGACAAGGAATGCAAGAATTTAAGAATGAAGTTTTATTGTGTGCCAAACTTCAACACCGAAATCTTGTCAAGGTTCTAGGTTGTTGCATCCAAGGAGAGGAGAAGATGCTCATCTATGAGTACATGCCCAACAAAAGCCTAGATAACCTTTTGTTCGATTCCAATCAAAGCAAAAACCTAGAATGGTCTAGGCGCTTTCACATTATATTTGGAATTGCACGAGGGCTTCTTTATCTTCATCAAGATTCCAGATTGAGGATTATACATCGAGATCTTAAAGCAAGTAATATTTTGTTAGATGGTAAGATGAACCCAAAAATTTCAGATTTTGGCATGGCAAGAATGTTTGGTGGTGATCAGATTGAAGGAAACACAAATAGAATAGCTGGTACCTAG 2028 0.4546 MATLLPLILAFMVNSLSLSSATDTLTQSHPLVDDANGTTYLVSSDGTFQLGFFSPGSSSNRYLGIWYTNIPDTTVVWVANRQTPLRNDTNFTTPSRLTITDERGLVLLSQNGTVVWSANTTVKSSSLKNGTVVAQLLDSGNLVLRNERGEVDDDGEEYIWQSFDYPTDTFLPGMKIGWDLRRGINRELRAWKSWDDPSVGDLRWGMVLGVTPELVMWKGEEEYYRSGPWNGAIFSGKTTPIFELQFVSNQDEVVYTSKLQNKSVITRVVLNGTTSYRQRYNWVEQTKSWRLYSSVPRDNCDNYNLCGPYGNCIVNDSPPCQCLSGFQAKSPQNYNALDWTQGCVRSELWSCGVKNRDGFRRFSGLKMPDTRKAWVNASMTLGDCRMKCLATCSCTAYANLYATGGGSGCLIWFGDLVDLRVASTPGQDLYIRMAAAETDAKEHKKMVWVVVIAVTVPLVIVVLLAFSCIRWRKRNHREKISIENINKGEQEDLELPFYDLATIVNATNDFSNDKKLGQGGFGPVYMGILADGQEIAVKRLSQSSGQGMQEFKNEVLLCAKLQHRNLVKVLGCCIQGEEKMLIYEYMPNKSLDNLLFDSNQSKNLEWSRRFHIIFGIARGLLYLHQDSRLRIIHRDLKASNILLDGKMNPKISDFGMARMFGGDQIEGNTNRIAGT 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1087 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Prci6g1087 675 Pfam S-locus glycoprotein domain 224 329 IPR000858 GO:0048544
Prci6g1087 675 Gene3D Phosphorylase Kinase; domain 1 468 585 - -
Prci6g1087 675 CDD B_lectin 40 166 IPR001480 -
Prci6g1087 675 Pfam Protein tyrosine and serine/threonine kinase 512 660 IPR001245 GO:0004672|GO:0006468
Prci6g1087 675 Gene3D Transferase(Phosphotransferase) domain 1 586 675 - -
Prci6g1087 675 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 475 585 - -
Prci6g1087 675 ProSiteProfiles EGF-like domain profile. 296 332 IPR000742 -
Prci6g1087 675 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 197 IPR036426 -
Prci6g1087 675 ProSiteProfiles Protein kinase domain profile. 510 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1087 675 SUPERFAMILY Protein kinase-like (PK-like) 495 674 IPR011009 -
Prci6g1087 675 SMART ntp_6 354 433 IPR003609 -
Prci6g1087 675 ProSiteProfiles PAN/Apple domain profile. 351 434 IPR003609 -
Prci6g1087 675 Gene3D - 17 163 IPR036426 -
Prci6g1087 675 CDD PAN_AP_plant 350 434 - -
Prci6g1087 675 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 17 163 - -
Prci6g1087 675 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 586 675 - -
Prci6g1087 675 SMART serkin_6 510 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1087 675 Pfam PAN-like domain 351 419 IPR003609 -
Prci6g1087 675 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 665 - -
Prci6g1087 675 ProSiteProfiles Bulb-type lectin domain profile. 22 157 IPR001480 -
Prci6g1087 675 SMART blect_4 32 166 IPR001480 -
Prci6g1087 675 Pfam D-mannose binding lectin 74 192 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1087 Prci-Chr6 7691467 7695718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1087 450 675 Receptor kinase-like Gene Family AT4G23190 57.826 1.30e-81 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci6g1087 PK_Tyr_Ser-Thr 1.9e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1087 - - gmx:100790436 822.387