Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1085 ATGGGCACTCTCTGTTTCATGAGCATCGTTGCTTTTGTTCTTGTCTATGGTTTCAAACCTTCCGTGGCAGTTAGTTCCATTCGTCAGTCCCAAAGCCTCAGTGACGCCCCAAGAACAACCTTGGTTTCCCAAGGTGGAAATTTTGAGCTCGGTTTCTTCACCCCAGGAAACTCTGACAAACGCTACCTGGGAATTTGGTACAGGAAAATCCCACAAACTGTTGTTTGGGTGGCAAACAGCGTCAACCCAATTAAAGATTCCTCCGGCGTATTAACGTTAAACACCACCGGCAACCTCGTCCTCACCCAAAACAACACCGTCGTCTGGTACACAACTTTAACAAAGCAGGCTCAGAATCCAGTGGCAGAGCTCTTAGATTCTGGGAACTTTGTGGTGAGGGAAGTAAATGAAGCAAACCCAGAAGTTTACTTATGGCAAAGCTTCGATTACCCTTCTGATACATTACTTCCTGGGATGAAGCTAGGATGGGACCTGAGAACTCGTCAGAATAAGAAAATAGCAGCTTGGAAGAGCTCAGATGATCCAACCCCAAGTGGATTTTCTTGGGAGTTATTGCTTCATAACTATCCAGAGTTTTTCCTTATGAAGGGTTCAGAGAAGTTCATGAGAATTGGACCTTGGAATGGTTTATATTTCAGTGGTGTACCAGATCTAAAGCCAAACCCGATTTATGATTTCAACTTTGTATCCACTACGGACGAGGTTTACTACATTTATAGCCTTAATAACACTTCTGTGATCTCAAGACTGATGATGAACCAAACCAAGTCTCAGGGCATACGTTATGTGTGGGTGGAAGCATACCAAAATTGGATGACTTATCAGTCACTGCCTAAAGATTATTGTGATAACTATAACCTCTGCGGACCAAATGGGAATTGCATTATCAGTGATTCACCAGTTTGCCAATGCTTGAAAGGGTTCAAGCCTAAGATACCACAAGCTTGGAACTCAATGGATTGGTCAGGCGGATGTGTGAGAAATGAAGCATTGAACTGTAGTAATGGAAGCAAGGATGGGTTTATCAGGTTGGCTGGGTTGAAAGTGCCAGAAACTGAACACACTTGGATAAATCAAAGTATGAGCCTAGAGGGATGCAGAAAGAAGTGTCTGAGTAATTGTTCTTGCATGGCCTATACAAGTTCTAATATATCAGGAGCGGGCAGTGGCTGCGTCATGTGGTTTGGGGACTTAATTGATATCAGACAGTCTACTTCTGATGGGCAGGATCTGTTTATTCGAATGGCTAATTCGGAATTAGAGGAAGAAAGGGAGAGCAAGAAGAAACTGACAATAACAATTGTTTCAACCTTGGGTGGCATTTCCGTGATGCTTTTACTAGGTTTTTGTTGTTATACCTACCAAGACCAGAGGAAGAGGAAGATGACTGATAAACCAGATAACAACGAAGAAGATCAAAATACGGGAGAAAATGTGGATGATCTGGATCTCCCATTGATTGACTTTTCAACAATATCTGTCGCCACCAATAACTTCTCATTAGAGAGAAAGATAGGAGAAGGAGGTTTTGGACCAGTATATAGGGGAGAATTAGTCCATGGGCAAGAGATTGCTGTTAAGAGGCTTTCAGGAAGCTCAAGGCAAGGCATAATTGAGTTCAAGAATGAAGTAAAACTGATAGCGAAACTTCAGCACCGAAATCTTGTCAAGCTTCTTGGTTGTTGCACCCAAGTGGATGACAAAATGTTGGTGTACGAATACATGCCTAATGGCAGCTTGGACAGCTTCATTTTTGATGACATAAAAGGCAAGGTGCTAGATTGGCCTAAACGATTCCATATTATTTGTGGAATTGCTAGGGGCCTTGTCTATCTTCATCAAGATTCTAGGTTAAGGATTATTCACCGAGATCTCAAAGCAAGCAATATTTTGCTTGATCACAAGCTAAATCCAAAAATTTCAGATTTCGGCATAGCTAGAATCTTTGGTGGGGACCAAATTGAAGGAAACACAAAGCGAGTAGTTGGCACTTATGGATATATGGCACCAGAATATGCCATAGATGGTCTTTTTTCCATTAAATCAGATGTTTTTAGTTTTGGTATATTGCTATTGGAGATTATAAGCGGAAAGAGAAGTAGAGGGTTCTATCATCCAAACCACTCCCTCAACTTAATTGGTCATGCTTGGAATCTGTGGAAAGAAGGAAGTGCAATAGAACTCATAGACTCAAACTTAGTGGAATCCTGCAATCTATCAAAAGTACTACGTTGCATTCATGTTGGCCTCTTGTGTGTCCAACACTACCCCGAGGATAGGCCTACCATGCCCTCTGTGGTTCTAATGTTGGGAAGTGAAACTGAACTGGCTCAACCTAAAGCACCTGGTTTTTATACCAAGAAGGATTTCATTGAAACAAATTCTAGCACATGCCAAATGGAAATTAACTCCACCAACGAAGTAACCATTACCTTGTTAGAAATGGGAAATAATCATTTTGCAAGTATTACTATTGCTCATATACTTCTATGTCTGCAAGTTTCCTTAGCATTAGACTACATTTCTCAGTCACAATCCATTAAAGATGACGGCGCAACCTTCGTTTCCGAAAGTGGAACCTTTGAACTTGGATTCTTCAGTCCTGGAAATTCCAACAACCGCTACCTGGGAATATGGTACAAGAATATCCCAATTCAAACGGTAGTTTGGGTCGCAAATCGGAACAACCCAATCAACGATTCCTCCGGCATCTTAACACTAAACAGCACCGGAAGTCTAGTCCTCACCCAAAACCACACAATAGTTTGGTCCACACCCTCCGTGAAAAACCCACAAAACCCAGTAGCCAATCTATTGGAATCTGGAAATCTTGTGGTTAGAGAGGAGAAAGAAGCAGGCCCAGAAACCTATGTGTGGCAAAGTTTTGATAACCCAACTGATACATTCTTGCCAGGTATGAAATTTGGGTGGGACTTAAGAACTGGTCTAAACAGGCGTCTGGTAGCTTGGAAGAGTCCAGATGATCCTTCTACAGGAGATTTCTCTTGGGGGATGGTGCTTAATAATTATCCTGATGCCTATATGATGAAGGGACCCCAGAAATTCTACCGAGCTGGACCATGGAACGGCCTTCGCCCAAGTGGTTCGCCACAAATCAAGGCCAACCCCATTTATGATTACAAGTTTGTGTCCAATAAGGATGAGATTTACTTCATGTATCAGCTCAGCAATCATTCTGTTATCTCAAGACAAGTATTGAACATAACAGCTCATGCTCGTCAACGTTATGTATGGATAGAATCTCAGCAAGTTTGGAGGATATATCAAACAGTGCCATTGGACTATTGTGATAGTTATGGCCTCTGTGGAGCTTACGGAATCTGCATAATTTCAGGATCCCCAGTTTGTCAATGCTTGAAAGGGTTTAGTCCCAAGTCGCCAAAAAAATGGAACTCCATGGATTGGTCTATAGGATGTGTCCGAAATGAACCATTAAGCTGCAAGGATGGCTTTGTCAAAATGAGTAATTTGAAGCTACCAGATACTGCAAATACATGGTTGGATGAGACAATCTCTCTAGAAGAATGCAGAAACAAATGCTTGAACAATTGTTCTTGTATGGCCTATACGAATTCAGACATAAGAGGTCAAGGTAGTGGCTGTGCCATGTGGTTTGGAGACCTAATTGACATTAGACAATTTTCGGGTGGTGGGCAGGATTTGTATGTTCGAATGGCTGCCTCAGAATTAGGTGAAGTACGAAGGAGCAAGAAGAAGTTGACTATAATAGTTGTCTCAACCTTGGCTGCAATTTCCGCAATGCTTTTGCTCGGTTTTTGTTGTTATATCTACCTTGACCAGAGGAACATCAAAGAGAAATCAGAAAACGAAGAAGATCAGAAGGAGGGGGACAGGGTTGATGATCTGGATCTCCCTTTGCTTGATTTTGAAACTGTAGCTGTTGCCACCAATAACTTCTCGGAGGAGAAAAAGATTGGAGAAGGAGGTTTTGGACCTGTATATAAGGGAAGATTAGTACATGGGCAAGAAATTGCTGTGAAGAGGCTTTCACAAAGATCAGGACAAGGAATGACAGAGTTCAAAAATGAAGTTAAATTGATTGCAAAACTTCAGCACCGAAATCTTGTAAAACTTCTTGGTTGTTGCATCAAAGGAAAAGACAAAATGCTGGTGTATGAATACATGCCTAACAGCAGCTTGGACTATTTCATTTTTGATAACACCAAAGGCAGGATCCTAGATTGGCCTAAACGCTACAACATTATTTGTGGAATTGCCCGGGGTCTTCTTTATCTTCACCAAGATTCTAGATTGAGGATTATTCATAGAGATCTTAAAGCAAGTAATGTTTTATTAGATGACAAGTTAAACCCCAAGATATCAGATTTTGGCATTGCTAAAATATTTGGAGGAGACCAAATTGAAGGAAACACAAAGCGAGTAGTTGGGACTTATGGGTACATGGCACCAGAATATGCAGCCGATGGACTTTTCTCTATAAAATCTGACGTATTCAGTTTTGGTATTTTGGTACTGGAAATTATAAGCGGGAAGAGAAGTAGAGGATTTTATCATCCTGACCAGTCCCTCAACCTCATTTGTCATGCTTGGAGTCTATGGAAAGAAGGAAGGGATTTTGAATTAATTAACTCAGAGCTGGAGGAATCTTGCATCCTATCAAAAGTACAACGTTGCATCCATATAGGCCTCTTATGTGTCAAGCAATACACGGAAGATAGACCAACCATGTCTACTGTGGTTCTAATGTTGGGGAGTGAAACTAAATTGCCTCAGCCTAAGGAGCCTGCTTTCTACACCAAGAAAGATTTCATTGAACCCTATTTCTTCTCAGGCAAAATGGACATTAACTCCACCAACGAATCAACTATTACCTTATTAGAAGCACCATGA 4914 0.4139 MGTLCFMSIVAFVLVYGFKPSVAVSSIRQSQSLSDAPRTTLVSQGGNFELGFFTPGNSDKRYLGIWYRKIPQTVVWVANSVNPIKDSSGVLTLNTTGNLVLTQNNTVVWYTTLTKQAQNPVAELLDSGNFVVREVNEANPEVYLWQSFDYPSDTLLPGMKLGWDLRTRQNKKIAAWKSSDDPTPSGFSWELLLHNYPEFFLMKGSEKFMRIGPWNGLYFSGVPDLKPNPIYDFNFVSTTDEVYYIYSLNNTSVISRLMMNQTKSQGIRYVWVEAYQNWMTYQSLPKDYCDNYNLCGPNGNCIISDSPVCQCLKGFKPKIPQAWNSMDWSGGCVRNEALNCSNGSKDGFIRLAGLKVPETEHTWINQSMSLEGCRKKCLSNCSCMAYTSSNISGAGSGCVMWFGDLIDIRQSTSDGQDLFIRMANSELEEERESKKKLTITIVSTLGGISVMLLLGFCCYTYQDQRKRKMTDKPDNNEEDQNTGENVDDLDLPLIDFSTISVATNNFSLERKIGEGGFGPVYRGELVHGQEIAVKRLSGSSRQGIIEFKNEVKLIAKLQHRNLVKLLGCCTQVDDKMLVYEYMPNGSLDSFIFDDIKGKVLDWPKRFHIICGIARGLVYLHQDSRLRIIHRDLKASNILLDHKLNPKISDFGIARIFGGDQIEGNTKRVVGTYGYMAPEYAIDGLFSIKSDVFSFGILLLEIISGKRSRGFYHPNHSLNLIGHAWNLWKEGSAIELIDSNLVESCNLSKVLRCIHVGLLCVQHYPEDRPTMPSVVLMLGSETELAQPKAPGFYTKKDFIETNSSTCQMEINSTNEVTITLLEMGNNHFASITIAHILLCLQVSLALDYISQSQSIKDDGATFVSESGTFELGFFSPGNSNNRYLGIWYKNIPIQTVVWVANRNNPINDSSGILTLNSTGSLVLTQNHTIVWSTPSVKNPQNPVANLLESGNLVVREEKEAGPETYVWQSFDNPTDTFLPGMKFGWDLRTGLNRRLVAWKSPDDPSTGDFSWGMVLNNYPDAYMMKGPQKFYRAGPWNGLRPSGSPQIKANPIYDYKFVSNKDEIYFMYQLSNHSVISRQVLNITAHARQRYVWIESQQVWRIYQTVPLDYCDSYGLCGAYGICIISGSPVCQCLKGFSPKSPKKWNSMDWSIGCVRNEPLSCKDGFVKMSNLKLPDTANTWLDETISLEECRNKCLNNCSCMAYTNSDIRGQGSGCAMWFGDLIDIRQFSGGGQDLYVRMAASELGEVRRSKKKLTIIVVSTLAAISAMLLLGFCCYIYLDQRNIKEKSENEEDQKEGDRVDDLDLPLLDFETVAVATNNFSEEKKIGEGGFGPVYKGRLVHGQEIAVKRLSQRSGQGMTEFKNEVKLIAKLQHRNLVKLLGCCIKGKDKMLVYEYMPNSSLDYFIFDNTKGRILDWPKRYNIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDDKLNPKISDFGIAKIFGGDQIEGNTKRVVGTYGYMAPEYAADGLFSIKSDVFSFGILVLEIISGKRSRGFYHPDQSLNLICHAWSLWKEGRDFELINSELEESCILSKVQRCIHIGLLCVKQYTEDRPTMSTVVLMLGSETKLPQPKEPAFYTKKDFIEPYFFSGKMDINSTNESTITLLEAP 1637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1085 1637 CDD STKc_IRAK 1326 1591 - -
Prci6g1085 1637 CDD B_lectin 857 972 IPR001480 -
Prci6g1085 1637 Pfam S-locus glycoprotein domain 210 318 IPR000858 GO:0048544
Prci6g1085 1637 Pfam S-locus glycoprotein domain 1030 1140 IPR000858 GO:0048544
Prci6g1085 1637 CDD PAN_AP_plant 1158 1240 - -
Prci6g1085 1637 CDD STKc_IRAK 512 777 - -
Prci6g1085 1637 ProSiteProfiles PAN/Apple domain profile. 340 423 IPR003609 -
Prci6g1085 1637 SUPERFAMILY Protein kinase-like (PK-like) 491 777 IPR011009 -
Prci6g1085 1637 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 182 IPR036426 -
Prci6g1085 1637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Prci6g1085 1637 ProSiteProfiles PAN/Apple domain profile. 1161 1240 IPR003609 -
Prci6g1085 1637 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1159 1239 - -
Prci6g1085 1637 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1283 1395 - -
Prci6g1085 1637 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 582 785 - -
Prci6g1085 1637 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Prci6g1085 1637 SMART serkin_6 506 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1085 1637 SMART serkin_6 1320 1591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1085 1637 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Prci6g1085 1637 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 835 1582 - -
Prci6g1085 1637 SUPERFAMILY Protein kinase-like (PK-like) 1307 1598 IPR011009 -
Prci6g1085 1637 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 841 969 - -
Prci6g1085 1637 Pfam D-mannose binding lectin 894 998 IPR001480 -
Prci6g1085 1637 Pfam D-mannose binding lectin 73 177 IPR001480 -
Prci6g1085 1637 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 469 581 - -
Prci6g1085 1637 ProSiteProfiles Bulb-type lectin domain profile. 845 966 IPR001480 -
Prci6g1085 1637 SMART egf_5 1109 1154 IPR000742 -
Prci6g1085 1637 SMART egf_5 288 333 IPR000742 -
Prci6g1085 1637 SUPERFAMILY alpha-D-mannose-specific plant lectins 895 1003 IPR036426 -
Prci6g1085 1637 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 148 - -
Prci6g1085 1637 CDD B_lectin 40 151 IPR001480 -
Prci6g1085 1637 Pfam PAN-like domain 1162 1225 IPR003609 -
Prci6g1085 1637 Pfam PAN-like domain 340 408 IPR003609 -
Prci6g1085 1637 Gene3D Transferase(Phosphotransferase) domain 1 582 790 - -
Prci6g1085 1637 Gene3D Transferase(Phosphotransferase) domain 1 1396 1604 - -
Prci6g1085 1637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1441 1453 IPR008271 GO:0004672|GO:0006468
Prci6g1085 1637 ProSiteProfiles Protein kinase domain profile. 1320 1605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1085 1637 SMART ntp_6 1160 1239 IPR003609 -
Prci6g1085 1637 SMART ntp_6 343 422 IPR003609 -
Prci6g1085 1637 CDD PAN_AP_plant 338 423 - -
Prci6g1085 1637 Gene3D - 841 969 IPR036426 -
Prci6g1085 1637 Gene3D - 21 148 IPR036426 -
Prci6g1085 1637 CDD EGF_CA 1108 1140 - -
Prci6g1085 1637 ProSiteProfiles Protein kinase domain profile. 506 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1085 1637 SMART blect_4 32 151 IPR001480 -
Prci6g1085 1637 SMART blect_4 852 972 IPR001480 -
Prci6g1085 1637 Pfam Protein tyrosine and serine/threonine kinase 507 774 IPR001245 GO:0004672|GO:0006468
Prci6g1085 1637 Pfam Protein tyrosine and serine/threonine kinase 1323 1589 IPR001245 GO:0004672|GO:0006468
Prci6g1085 1637 Gene3D Hepatocyte Growth Factor 1156 1236 - -
Prci6g1085 1637 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1396 1599 - -
Prci6g1085 1637 Gene3D Phosphorylase Kinase; domain 1 465 581 - -
Prci6g1085 1637 Gene3D Phosphorylase Kinase; domain 1 1281 1395 - -
Prci6g1085 1637 ProSiteProfiles EGF-like domain profile. 1106 1142 IPR000742 -
Prci6g1085 1637 Coils Coil 420 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1085 Prci-Chr6 7650860 7662442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1085 437 791 Receptor kinase-like Gene Family AT4G23230 52.809 3.17e-118 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci6g1085 PK_Tyr_Ser-Thr 7.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1085 - - tcc:18593897 1932.15