Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1083 ATGGCGAACGATCAATTTCAAGCGAGTACGGGAAACTGGTGGGACTCTTCATCTTCTAGACATGTCCGATTCGAGACCGCTCCTTCCCAGTCATCTTCATCTAACCTCACCACCACCTTCCCCAACTTCACTTGGCCCATGGATCACCTCGACCTCAAGCCTTCCTCTTCCATGGCTCTAGCCCTCTCCTCCCAACCCTTGGATTGGAATATCAATAATCAACCCTCTCATCACCATCTTCTTAGAGGAGAGAAGGGGGTCTCCGATGGCCGATTCAGATCCATGTTTCAAGATGAGTGGAGATCATCAGAGAAGCTGTTGTTTAATTCTGCAGACTCGTCTTCAACTACCACTGATCAGTACAGTGCTTCTGGGGATAATAGTATGGTCACGACCAGCCAAGGGCTAGCTTGTAGTTTTCAGATGGATAATTCTAATTCCTATTCTGCTACGAATCATTCATTATTAATACAGGGATTATTAGGGCCTGAAGGTTCTTCTTCTTCTTCCTCCTTCGACAATACTCATAATCGCTCCTGCAGCTTGAACTTTCCCTACGGGTCGTCGGCCTTGAGCTCTGATAATGATCCTTCAATGGCTTCTTGGCCCAAGGTTTCTCAGTTTCTTAGGGCTTCGCCGCCGAAACAAACACCACATCACGGCGGCGGTAACAGCCAGTTGCATTTTACAAACAACGCGACCTTCTGGAACGCTTCTGAAGCTCACCACCACCACCATCACGATGCCGCTATTAAAGAAGCTCGACCTTCCTTCTTCCCTTCCTTGCAGCCTCCTATTCAGACGCCCAATTTTGATGCACAATCAAAGAATATTTGTGGCGGAAGAGAAACGAGTAGTGTGGGGAAGAAAAGTGGAGGTGAGGCGACACCAAAAAGAGCTCGAAACGAAACCTCATCAACTTTGCCGCCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACCGAATTACTGCTCTTCAACAGTTGGTTTCGCCTTTCGGCAAGACTGATACAGCCTCAGTGCTCTCCGAAGCCATCGAGTATATCAAATTCCTCCATGACCAAGTCTCTGGTTTAAGCACCCCATATATGAAAAGTGGAGCTCCATTACAGCACCAACAGAGTTCTGGAAAATGCAAGGAAAGTGAAGGCCTAAAACAAGACCTGAGAAGCAGAGGGTTATGTTTGGTGCCAGTTTCAAGTACTTTTCCGGTGACTCATGAAACCACTGTTGATTTTTGGATGCCACCTTTTGGAGCTACTTTCAGATGA 1269 0.4704 MANDQFQASTGNWWDSSSSRHVRFETAPSQSSSSNLTTTFPNFTWPMDHLDLKPSSSMALALSSQPLDWNINNQPSHHHLLRGEKGVSDGRFRSMFQDEWRSSEKLLFNSADSSSTTTDQYSASGDNSMVTTSQGLACSFQMDNSNSYSATNHSLLIQGLLGPEGSSSSSSFDNTHNRSCSLNFPYGSSALSSDNDPSMASWPKVSQFLRASPPKQTPHHGGGNSQLHFTNNATFWNASEAHHHHHHDAAIKEARPSFFPSLQPPIQTPNFDAQSKNICGGRETSSVGKKSGGEATPKRARNETSSTLPPFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHDQVSGLSTPYMKSGAPLQHQQSSGKCKESEGLKQDLRSRGLCLVPVSSTFPVTHETTVDFWMPPFGATFR 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1083 422 SMART finulus 313 357 IPR011598 GO:0046983
Prci6g1083 422 CDD bHLH_AtbHLH_like 308 359 IPR045239 -
Prci6g1083 422 FunFam Transcription factor bHLH123 family 312 374 - -
Prci6g1083 422 MobiDBLite consensus disorder prediction 278 308 - -
Prci6g1083 422 Gene3D - 312 375 IPR036638 GO:0046983
Prci6g1083 422 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 302 351 IPR011598 GO:0046983
Prci6g1083 422 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 312 367 IPR036638 GO:0046983
Prci6g1083 422 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 116 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1083 Prci-Chr6 7629677 7633577 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1083 227 422 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 63.000 7.79e-71 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1083 - - gmx:100778697 397.897