Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1082 ATGGCGAACGATCAATTTCAAGCGAGTACGGGAAACTGGTGGGACTCTTCATCTTCTAGACATGTCCGATTCGAGACCGCTCCTTCCCAGTCATCTTCATCTAACCTCACCACCACCTTCCCCAACTTCACTTGGCCCATGGATCACCTCGACCTCAAGCCTTCCTCTTCCATGGCTCTAGCCCTCTCCTCCCAACCCTTGGATTGGAATATCAATAATCAACCCTCTCATCACCATCTTCTAGGAGAGAAGGGGGTCTCCGATGGCCGATTCAGATCCATGTTTCAAGATGAGTGGAGATCATCAGAGAAGCTGTTGTTTAATTCTGCAGACTCGTCTTCAACTACCACTGATCAGTACAGTGCTTCTGGGGATAATAGTATGGTCACGACCAGCCAAGGGCTAGCTTGTAGTTTTCAGATGGATAATTCTAATTCCTATTCTGCTACGAATCATTCATTATTAATACAGGGATTATTAGGGCCTGAAGGTTCTTCTTCTTCTTCCTCCTTCGACAATACTCATAATCGCTCCTGCAGCTTGAACTTTCCCTACGGGTCGTCGGCCTTGAGCTCTGATAATGATCCTTCAATGGCTTCTTGGCCCAAGGTTTCTCAGTTTCTTAGGGCTTCGCCGCCGAAACAAACACCACATCACGGCGGCGGTAACAGCCAGTTGCATTTTACAAACAACGCGACCTTCTGGAACGCTTCTGAAGCTCACCACCACCACCATCACGATGCCGCTATTAAAGAAGCTCGACCTTCCTTCTTCCCTTCCTTGCAGCCTCCTATTCAGACGCCCAATTTTGATGCACAATCAAAGAATATTTGTGGCGGAAGAGAAACGAGTAGTGTGGGGAAGAAAAGTGGAGGTGAGGCGACACCAAAAAGAGCTCGAAACGAAACCTCATCAACTTTGCCGCCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACCGAATTACTGCTCTTCAACAGTTGGTTTCGCCTTTCGGCAAGACTGATACAGCCTCAGTGCTCTCCGAAGCCATCGAGTATATCAAATTCCTCCATGACCAAGTCTCTGGTTTAAGCACCCCATATATGAAAAGTGGAGCTCCATTACAGCACCAACAGAGTTCTGGAAAATGCAAGGAAAGTGAAGGCCTAAAACAAGACCTGAGAAGCAGAGGGTTATGTTTGGTGCCAGTTTCAAGTACTTTTCCGGTGACTCATGAAACCACTGTTGATTTTTGGATGCCACCTTTTGGAGCTACTTTCAGATGA 1266 0.4708 MANDQFQASTGNWWDSSSSRHVRFETAPSQSSSSNLTTTFPNFTWPMDHLDLKPSSSMALALSSQPLDWNINNQPSHHHLLGEKGVSDGRFRSMFQDEWRSSEKLLFNSADSSSTTTDQYSASGDNSMVTTSQGLACSFQMDNSNSYSATNHSLLIQGLLGPEGSSSSSSFDNTHNRSCSLNFPYGSSALSSDNDPSMASWPKVSQFLRASPPKQTPHHGGGNSQLHFTNNATFWNASEAHHHHHHDAAIKEARPSFFPSLQPPIQTPNFDAQSKNICGGRETSSVGKKSGGEATPKRARNETSSTLPPFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHDQVSGLSTPYMKSGAPLQHQQSSGKCKESEGLKQDLRSRGLCLVPVSSTFPVTHETTVDFWMPPFGATFR 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1082 421 Gene3D - 311 374 IPR036638 GO:0046983
Prci6g1082 421 FunFam Transcription factor bHLH123 family 311 373 - -
Prci6g1082 421 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 301 350 IPR011598 GO:0046983
Prci6g1082 421 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 114 402 - -
Prci6g1082 421 CDD bHLH_AtbHLH_like 307 358 IPR045239 -
Prci6g1082 421 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 311 366 IPR036638 GO:0046983
Prci6g1082 421 SMART finulus 312 356 IPR011598 GO:0046983
Prci6g1082 421 MobiDBLite consensus disorder prediction 277 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1082 Prci-Chr6 7629676 7633577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1082 226 421 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 63.000 6.80e-71 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1082 - - gmx:100796549 398.282